Gene PHATRDRAFT_49982 details

Gene Information

• Locus tag: PHATRDRAFT_49982
• ID: 7198770
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011694
• Strand: -
• Start bp: 26465
• End bp: 28525
• Gene Length: 2061 bp
• Protein Length: 614 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002184877
• Protein GI: 219129398

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.806954
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CATGGGGCCA TTCATGCTGT GCAATAGTTG ACTGTGATCG TGAGACTTTC GCTTTTTCAG 
ATTGACTGCC TGGATTGATA CGGTTCAGCA GTCGACCATG TCGGAAAGGG GTTTGTCGTC 
ACCCCGCGGA AAGTCTACTT TCCCAGTGAT ACGTCGCAAC AGTTTCAACG AAAGCGAGTA 
CAGTCGATCA TCCTACGAAT CGTTAGGTCT CGTCGATCAT GTGCATCGCC TGGAGGCGCT 
TTTGTCCAAT TCGCTAGAAA CCAGCAGTAC ACTGCAGACA TGTGTCGATG AAGACGATGA 
CTTGGCAGCG GAATTGAAAC GGCTAGAACA CGCAGAGCAG TTGCTGCGGC AAGAGTTGGA 
AGACCTCGAA GTAAATGGCG TCCCGAAGCC GGATTCATCG ACGCAAGGCG TTTTTTCGAG 
CGACAATCGA GCTCGCGAAA GGACGCTGAG CGCTTCCAGA GAGGAACTGA CAGTGAGCAA 
TGTAGAAGAC GACGACGACG ACGCAGACGA TATGTTTAAC TATATGCTGA ACTTTACGAC 
TGGAGCGTCT CCCCTTTCCA CTTCGAAAGG ACGCCTGAAA ACAGACAGCG ACAGGTTCGA 
TGCCATTTCA ACCCCCCCGC ACACACCGCC TCGAACCGTC CTGTCACCAC TGCGGCAACG 
TCGCTTGGAT GTCCTGGGTT TGGATGACAA CGCTTCTTTC CACGAACAAA GCTGCGCCCA 
AGAAGATGGC AACACAAGAC GGTCGTCGAG TTGGAGTGTG GAGGATTGGT CCTCCTACAA 
TCAACCGTCG GAGGGGAGCC TCGAGTCGGA GAGCATCGAG TCTGGATCGG TATTCTCCAA 
TCTAGGCGTC GCCAGCGTAG ATCGCTCCTC CTCCTTTCCA GTGGACGTGC TAGCCCGTGG 
CGATGTTGAC GATGAGGATA AACCTGTTAA AGCGACAAAG GTTGATGTAT TGGCTGATGG 
CGATGTGGTT GAAGTGGAAG AGATCGATGA AGTGCCTCTC GAGGCTGCCG ATACACTGGC 
ATCCTCAACA CCGTGGGCCA GGAGAAGGAT TCACAATCAA ACAGAGATGC AGCAGAGTAA 
ATCCACAACA CCAATCATTT CAAGTCGAAG TATTACGACT TCCGCAGACA CAGTTCAAAG 
CAGTTCTATC GAAGTTAGTC GGAGTCCATC ATCAGCAGCC ATACCAAAGA GAATCCCCGC 
AATCACCCCC CGCCACACAA AGACACCAGA ATATGATCAC TTTCAAGGCC CAGATACCTC 
CTCTCAACAT ACCATTCCCA CTCGAAAATC ATCGCGAAAG AAAAATGAAT GGTCGGCCAT 
GCTGTCCCAT TCGGGGAAAG CAAAGGTCAT ACTGCGTCCC TTGGCCAATG ATCGTCCTGC 
TACAACAAGG GATAATTCAA TGTCTCCTCG TCTCTTTCCA AAGACTCGAA ATTCGCCTTC 
GGCGTTTGGC AATGGACATG CCGTCGAGAC CCGCGGTATA CTCCAAACGG AAACTTATCC 
GTCGTCGATC TCCAAGTGCG ACGATCCCCA ACGATTCGAA GATTTACAAT CTTTCGGAGC 
GGGGAGTCAA AATCCGGCCC AGCAACAAGC CAATGACGAA AGCACATCGC GGCGGGTTGG 
AAGTCTCGTC TCGGCAGCTC CGAGGCAGGA TACACGCCGG CCGAAGGTTC CTCACCGTAT 
CGCGATGGGC TATGCTCATC ACCAACTGCG AGACGATGAC GATCAGGATG CGCAGGTGTC 
TACATGCGGA TGGAAGTTCG GTGGCGAAAG GACTTCGAAC GGAATATTCT TTTGCTTAGC 
CTTGATTGCA TTGGTTCTGT TAGTTGCGGT GCCCACGGCG TTCATCTTGG GAAGTCGATA 
CAACAAACCT TAAACCCCTC GCTGCTTTCT GTAAATTTTA ACCGAGGCGC CGGTGCACTT 
TCCCGAATTG ATGACAGTAC CCGCTCTCCT TGCTCCGCTG TTGCCGCCCG CAAGGCCACG 
TTACGCTATT CCATCGACTA TTATTCTACA GGCGGTGCAC CGCACCTTGC CGGTATCCTG 
CACCTTTTTC AATATCACTA A 

 

Protein sequence

MSERGLSSPR GKSTFPVIRR NSFNESEYSR SSYESLGLVD HVHRLEALLS NSLETSSTLQ 
TCVDEDDDLA AELKRLEHAE QLLRQELEDL EVNGVPKPDS STQGVFSSDN RARERTLSAS 
REELTVSNVE DDDDDADDMF NYMLNFTTGA SPLSTSKGRL KTDSDRFDAI STPPHTPPRT 
VLSPLRQRRL DVLGLDDNAS FHEQSCAQED GNTRRSSSWS VEDWSSYNQP SEGSLESESI 
ESGSVFSNLG VASVDRSSSF PVDVLARGDV DDEDKPVKAT KVDVLADGDV VEVEEIDEVP 
LEAADTLASS TPWARRRIHN QTEMQQSKST TPIISSRSIT TSADTVQSSS IEVSRSPSSA 
AIPKRIPAIT PRHTKTPEYD HFQGPDTSSQ HTIPTRKSSR KKNEWSAMLS HSGKAKVILR 
PLANDRPATT RDNSMSPRLF PKTRNSPSAF GNGHAVETRG ILQTETYPSS ISKCDDPQRF 
EDLQSFGAGS QNPAQQQAND ESTSRRVGSL VSAAPRQDTR RPKVPHRIAM GYAHHQLRDD 
DDQDAQVSTC GWKFGGERTS NGIFFCLALI ALVLTRSPCS AVAARKATLR YSIDYYSTGG 
APHLAGILHL FQYH