Gene PHATRDRAFT_40952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40952 
Symbol 
ID7198683 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011694 
Strand- 
Start bp364364 
End bp365146 
Gene Length783 bp 
Protein Length215 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184947 
Protein GI219129545 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.228231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCA ACGTTAGCAA AATGCACTTG GATTTCGTGG TTGAAGATGG GTCCACAACC 
ACTGAGCAAA AGTCGGATTG CGTAAGTCCA TTTGATGAGA AAGGATAAAA AAACGGCGGT 
CCCAACTCTG ACTGTGAGCG TGTCCGACTA TCGGAATCAA GCAATAGCTG CACATTTTCT 
GAGCAATACT AACGCCGCCC TTATTTCCTT GCACAGCTCA AACTTCTCAA AGTTGTCGTC 
AAGAACCTCG CGGATCCCGT CAAGTCAAAA GACGAAAAGT TTCAAACTTT GAAACTCGAC 
AATCCTAAAG TATCCGAGAA GCTCCTGCCT TGTCCGTCCG CCAAAAAGTA TTTATTGTCG 
CTCGGTTTTA CGGAGAGAAC TACTCCGGAC TATCAAAAGA TTCTTTTCTG CCAGCAACCT 
CACCGTGAAA CATTTCAAAA GGCGTTGAGG GCGGTGTCAG ATGCACTGGG AAAGATTGGG 
GCTCCGGTAG CTAAGAAACC CCGCACTGTT GAAGAAAGTC TTGCTACTCT GGCACCAACG 
CCCTCCACTC TCCTTCCATT TGAACGCCTA TCGGAAAAAC AAAAGGCCCG TCGCCTCATG 
GAAGAAAAAG ACCAACGCGA AAAGGAATTG GCCAAAGTGC ATCGCGCCAA GGCCGTCGAA 
CAATTACGGC GGGACAAATT TGTGCGGGAG AATGATCCCA ACTGGAAGTC GGGACCGAGT 
GCAGCAGTCA ATAAAACGGG CAACACAATT GCCACATTTC GGGATCGGCA CGGTGAAACT 
TAA
 
Protein sequence
MSSNVSKMHL DFVVEDGSTT TEQKSDCLKL LKVVVKNLAD PVKSKDEKFQ TLKLDNPKVS 
EKLLPCPSAK KYLLSLGFTE RTTPDYQKIL FCQQPHRETF QKALRAVSDA LGKIGAPVAK 
KPRTVEESLA TLAPTPSTLL PFERLSEKQK ARRLMEEKDQ REKELAKVHR AKAVEQLRRD 
KFVRENDPNW KSGPSAAVNK TGNTIATFRD RHGET