Gene PHATRDRAFT_40917 details

Gene Information

• Locus tag: PHATRDRAFT_40917
• ID: 7198747
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011694
• Strand: +
• Start bp: 265835
• End bp: 266377
• Gene Length: 543 bp
• Protein Length: 180 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002184848
• Protein GI: 219129338

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.251783
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACGGAA CTTCGCGAAC TGCACTCATT CTTGCTGCTG TGGTCCTGGC AGCGGTGGTC 
TGCGTGATAA CAATTCCGGT CGTTCTAACA CAGGATAAGC GAGATTCCGC GGAAGCTGGA 
GCCCAAGCTC TCGCTACTGA TGACAAGCCG TCGCTTGTGG AAACAAATGG AGGTTTGTCT 
GTTGCCGTGC AAGAATCTGA TCCACCATCG GACGTGCCAT CACAAGTGCC ATCGGACAAG 
CCATCCTTTA TCCCATCAGA CGTTCCTTCG ACTATACCGT CTGACTTTCC GTCTTCCGTC 
CCGTCGGATG TACCTTCTGC GGCACCATCA CTTCTTCCAC TTATCACTAT TGATCCAAAA 
GCTCCTGCCT TAGGGTCAGA CTTTCCATCT CTTGCACCTT TTTCTTGGAG CACACAAGAG 
CCTACGGTAG GCCTATTTCC TGACGTTGCT CTCATCGTCG ATGAAGTCGA GTCTCCAGAC 
CCTCCATTCA CACCAATTAA CAAGAAGAAG CGACTTCGCA TGAACAACCA CTTTCCTCTT 
TGA 

 

Protein sequence

MYGTSRTALI LAAVVLAAVV CVITIPVVLT QDKRDSAEAG AQALATDDKP SLVETNGGLS 
VAVQESDPPS DVPSQVPSDK PSFIPSDVPS TIPSDFPSSV PSDVPSAAPS LLPLITIDPK 
APALGSDFPS LAPFSWSTQE PTVGLFPDVA LIVDEVESPD PPFTPINKKK RLRMNNHFPL