Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_40842 |
Symbol | |
ID | 7198700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011694 |
Strand | - |
Start bp | 77023 |
End bp | 77559 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | |
GC content | 58% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184886 |
Protein GI | 219129417 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 73 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAAAA GGAAAATTCC CCAACACCGG ACTTTTGGTG ATCACTCTTT CTGGGACACC CACTGCCAAT CCTACCCTGT CTTCCGTCGA CGCGACGCCG TCCCTGACCC CGTCCGCCTC TCGTCGGACT CCGCGATTGG AGTTACAGAC TCCGTCGTCG CCAATACGGT CCCCGTCAAT CCGTACCGCC GAATCCGTCC CGAATCAATC CCTGCTCAAC GGCGTGCCGG CGATGGATCA TCCGACTCCT GTACCTCACC AGAGCACCGC CGAGAGCCAA GCCAAAACAA AACACAGGCC GTGAATGCGC GTCTCTCGAA GGCCTCATTA TCACGGACCG GAAGGAGCGC TCCGACCAGT ATACCGCCAA GTGCGGAAAG CAGAGACACC GGAATGAAAG TGCCTTTCCC CGGCACTGCC TACCCGTCGG AGCAATCATC ACCAACGCAG AGTGTACAAG CCCTTTTCGT CCATTCTGAA TCCATCCCAA GCAATTCTTC GCCACGCCTC CTCCACTCCA ACGGACCCCA ATATTGA
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Protein sequence | MTKRKIPQHR TFGDHSFWDT HCQSYPVFRR RDAVPDPVRL SSDSAIGVTD SVVANTVPVN PYRRIRPESI PAQRRAGDGS SDSCTSPEHR REPSQNKTQA VNARLSKASL SRTGRSAPTS IPPSAESRDT GMKVPFPGTA YPSEQSSPTQ SVQALFVHSE SIPSNSSPRL LHSNGPQY
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