Gene PHATRDRAFT_40842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40842 
Symbol 
ID7198700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011694 
Strand
Start bp77023 
End bp77559 
Gene Length537 bp 
Protein Length178 aa 
Translation table 
GC content58% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184886 
Protein GI219129417 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones73 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAAA GGAAAATTCC CCAACACCGG ACTTTTGGTG ATCACTCTTT CTGGGACACC 
CACTGCCAAT CCTACCCTGT CTTCCGTCGA CGCGACGCCG TCCCTGACCC CGTCCGCCTC
TCGTCGGACT CCGCGATTGG AGTTACAGAC TCCGTCGTCG CCAATACGGT CCCCGTCAAT
CCGTACCGCC GAATCCGTCC CGAATCAATC CCTGCTCAAC GGCGTGCCGG CGATGGATCA
TCCGACTCCT GTACCTCACC AGAGCACCGC CGAGAGCCAA GCCAAAACAA AACACAGGCC
GTGAATGCGC GTCTCTCGAA GGCCTCATTA TCACGGACCG GAAGGAGCGC TCCGACCAGT
ATACCGCCAA GTGCGGAAAG CAGAGACACC GGAATGAAAG TGCCTTTCCC CGGCACTGCC
TACCCGTCGG AGCAATCATC ACCAACGCAG AGTGTACAAG CCCTTTTCGT CCATTCTGAA
TCCATCCCAA GCAATTCTTC GCCACGCCTC CTCCACTCCA ACGGACCCCA ATATTGA
 
Protein sequence
MTKRKIPQHR TFGDHSFWDT HCQSYPVFRR RDAVPDPVRL SSDSAIGVTD SVVANTVPVN 
PYRRIRPESI PAQRRAGDGS SDSCTSPEHR REPSQNKTQA VNARLSKASL SRTGRSAPTS
IPPSAESRDT GMKVPFPGTA YPSEQSSPTQ SVQALFVHSE SIPSNSSPRL LHSNGPQY