Gene PHATRDRAFT_2382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_2382 
SymbolTRD5 
ID7198767 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011694 
Strand
Start bp405055 
End bp412865 
Gene Length7811 bp 
Protein Length253 aa 
Translation table 
GC content57% 
IMG OID 
ProductTRD5 
Protein accessionXP_002184873 
Protein GI219129390 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GAAGGTACAC TACTCGGGAC GGCTGAGGGG CTTGTAGAGG GTACAGAAGT AGGCATTCGT 
GATGGATCCG TAGACGGTAC TGACGAAGGA GACATAGAAG GACTGCTGCT TGGTACCGAA
GAGGGATTCT GGGAAGGGTT CTCCGACGGA GAAGAGGACG GTTGCACTGA CGGAACAGTC
GAAGGCAATG CGCTAGGACT GTTTGATGGC AGCAAGCTCG GCTGCGCCGA CGGGACAGCC
GTTGGGTTTC CGCTGGGTGT GGAAGAGGGA ATGCTACTCG GCCTGGCACT CGGCAACTCG
GACGGGACTG CTGAGGGATC TCTTGAGGGT AGTAAGGATG GACTCGCAGA GGGAATGGCA
GAAGGAGCTG AAGTTGGTTC GAGAGACGGC TGCGCCGATG GCTGCTGGGA GGGTTGACCG
GAAGGCAGGC GGGAAGGCAC CAGCGAGGGG ACACTGGAGG GATCTCGTGA TGGAGAAACC
GAGGGCAGTC GCGATGGCAC ATCCGTTGGA CTGGCTGATG GTAGTCTGGA CGGGCTTTCC
GATGGTGACA ATGACGGCAT GGAGGACGCC AGGGGCGACA AGATCACACC GATGTATCGG
ATTGTGGACG CAGTCTTGGT ATCCGCGTCA CCACCCGTTC CGTCGGCGGA ACTGTTGTTT
GGCGCCAGGT CCGAGTTAGT AGCGTTCTCG GTGGAAACGA CTTCGACCTC AATACCGGCA
CTTCCTAGAA ACATTCCCAC CAGGCCGATT CGCGGTTGAA ACTGCAGCAA GGTGGAATTC
AAAAACAGAT CCAGCGCGAT TTCGCGGAGT TCGGGCGTGC CGAGGGTCGA GTTCACCGTG
TATACGCCGG AACTGACCTC GGTAAAGGTT ACGCCTGGAA CAGTTCCCAG CGGGACCAGT
TCACCAATGA GGTTGCCGCT GTCCATTGGT ACCCGTAATA TCACCGATAG AACTTCGGTG
CCGTCCTGGT CGACACTACG ACCGGGATTC ACTCCGATCA AGCCAGGAGC GTTCTCTCGA
AGGTTCAGCG GACTCACCAC CGTCACTGTT ACGTTGTCAG CGACCGCGAG GACCTCCACA
GGAAAGGGAA AGGTTTGGTT GGAATTCGCA TTCATGGGAG TAGTACGTAC AGTGATATCC
AGGATAAAGT CGGTGTCGGA TTGCGGTGGG CCAGTGAGAA TAATGCTGTT CAAAACCGCT
CGTATCTGGG CCTCGTTCGC ACCAGGTACG TCGAACGTGC CTCCTGCTGG ATTCACAAAC
GTCGCTGTTT GGGTGTTACC TGCGGGATCT ATGTACGTTA GCATTGTCCC GGGCGGAATG
CTGGAGATGA CAATGTCGGC GATCTGGTCC GGTCGACCCG TGTCGATCAG TGAGACAGTG
ATGTCGGGAC CGATAAGCTC TGGAACATCC TCAACGATAG TTGTAGACCC CGTGATGTTG
ACGTTGAAGT CGAATACTGA CGGAGTTTGC GAAGGCAAAA GACTAGGAAT ATTTGATGGA
TGACTGGTGG GCATTCTAGA CGGAGAAGAG GACGGTTGCA CTGACGGAAC AGTCGAAGGC
AATGCGCTAG GACTGTTTGA TGGCAGCAAG CTCGGCTGCG CCGACGGGAT AGCCGTTGGG
TTTCCGCTGG GTGTGGAAGA GGGAATGCTA CTCGGCCTGG CACTCGGTAA CTCGGACGGG
ACTACTGAGG GATCTCGTGA GGGTAGTAAG GATGGACTCG CAGAGGGAAT GGCAGAAGGA
GCTGAAGTTG GTTCGAGAGA CGGCTGCGCC GATGGCTGCT GGGAGGGTTG ACCGGAAGGC
AGGCGGGAAG GCACCAGCGA GGGGACACTG GAGGGATCTC GTGATGGAGA AACCGAGGGC
AGTCGCGATG GCACATCCGT TGGACTGGCT GATGGTAGTC TGGACGGGCT TTCCGATGGT
GACAATGACG GCATGGAGGA CGCCAGGGGC GACAAGATCA CCCCGATGTA TCGGATTGTG
GACGCAGTCT TGGTATCCGC GTCACCACCC GTTCCGTCGG CGGAACTGTT GTTTGGCGCC
AGGTCCGAGT TAGTAGCGTT CTCGGTGGAA ACGACTTCGA CCTCAATACC GGCACTTCCT
AGAAACATTC CCACCAGGCC GATTCGCGGT TGAAACTGCA GCAAGGTGGA ATTCAAAAAC
AGATCCAGCG CGATTTCGCG GAGTTCGGGC GTGCCGAGGG TCGAGTTCAC CGTGTATACG
CCGGAACTGA CCTCGGTAAA GGTTACGCCT GGAACAGTTC CCAGCGGGAC CAGTTCACCA
ATGAGGTTGC CGCTGTCCAT TGGTACCCGT AATATCACCG ATAGAACTTC GGTGCCGTCC
TGGTCGACAC TACGACCGGG ATTCACTCCG ATTAAGCCAG GAGCGTTCTC TCGAAGGTTC
AGCGGACTCA CCACCGTGAC TGTTACGTTG TCAGCGACCG CGAGGACCTC CACAGGAAAG
GGAAAGGTTT GGTTGGAATT CGCATTCATG GGAGTAGTAC GTACAGTGAT ATCCAGGATA
AAGTCGGTGT CGGATTGCGG TGGGCCAGTG AGAATAATGC TGTTCAAAAC CGCTCGTATC
TGGGCCTCGT TCGCACCAGG TACGTCGAAC GTGCCTCCTG CTGGATTCAC AAACGTCGCT
GTTTGGGTGT TACCTGCGGG ATCTATGTAC GTTAGCATTG TCCCGGGCGG AATGCTGGAG
ATGACAATGT CGGCGATCTG GTCCGGTCGA CCCGTGTCGA TCAGTGAGAC AGTGATGTCG
GGACCGATAA GCTTTGGAAC ATCCTCAACG ATAGTTGTAG ACCCCGTGAT GTTGACGTTG
AAGTCGAATA CTGACGGAGC TTGCGAGGGC ATGAGACTAG GCTGAGCTGA AGGTACACTA
CTCGGGACGG CTGAGGGGCT TGTAGAGGGT ACAGAAGTAG GCATTCGTGA TGGATCCGTA
GACGGTACTG ACGAAGGAGA CATAGAAGGA CTGCTGCTTG GTACCGAAGA GGGATTCTGG
GAAGGGTTCT CCGACGGAGA AGAGGACGGT TGCACTGACG GAACAGTCGA AGGCAATGCG
CTAGGACTGT TTGATGGCAG CAAGCTCGGC TGCGCCGACG GGATAGCCGT TGGGTTTCCG
CTGGGTGTGG AAGAGGGAAT GCTACTCGGC CTGGCACTCG GCAACTCGGA CGGGACTGCT
GAGGGATCTC TTGAGGGTAG TAAGGATGGA CTCGCAGAGG GAATGGCAGA AGGAGCTGAA
GTTGGTTCGA GAGACGGCTG CGCCGATGGC TGCTGGGAGG GTTGACCGGA AGGCAGGCGG
GAAGGCACCA GCGAGGGGAC ACTGGAGGGA TCTCGTGATG GAGAAACCGA GGGCAGTCGC
GATGGCACAT CCGTTGGACT GGCTGATGGT AGTCTGGACG GGCTTTCCGA TGGTGACAAT
GACGGCATGG AGGACGCCAG GGGCGACAAG ATCACACCGA TGTATCGGAT TGTGGACGCA
GTCTTGGTAT CCGCGTCACC ACCCGTTCCG TCGGCGGAAC TGTTGTTTGG CGCCAGGTCC
GAGTTAGTAG CGTTCTCGGT GGAAACGACT TCGACCTCAA TACCGGCACT TCCTAGAAAC
ATTCCCACCA GGCCGATTCG CGGTTGAAAC TGCAGCAAGG TGGAATTCAA AAACAGATCC
AGCGCGATTT CGCGGAGTTC GGGCGTGCCG AGGGTCGAGT TCACCGTGTA TACGCCGGAA
CTGACCTCGG TAAAGGTTAC GCCTGGAACA GTTCCCAGCG GGACCAGTTC ACCAATGAGG
TTGCCGCTGT CCATTGGTAC CCGTAATATC ACCGATAGAA CTTCGGTGCC GTCCTGGTCG
ACACTACGAC CGGGATTCAC TCCGATTAAG CCAGGAGCGT TCTCTCGAAG GTTCAGCGGA
CTCACACCGT GACTGTTACG TTGTCAGCGA CCGCGAGGAC CTCCACAGGA AAGGGAAAGG
TTTGGTTGGA ATTCGCATTC ATGGGAGTAG TACGTACAGT GATATCCAGG ATAAAGTCGG
TGTCGGATTG CGGTGGGCCA GTGAGAATAA TGCTGTTCAA AACCGCTCGT ATCTGGGCCT
CGTTCGCACC AGGTACGTCG AACGTGCCTC CTGCTGGATT CACAAACGTC GCTGTTTGGG
TGTTACCTGC GGGATCTATG TACGTTAGCA TTGTCCCGGG CGGAATGCTG GAGATGACAA
TGTCGGCGAT CTGGTCCGGT CGACCCGTGT CGATCAGTGA GACAGTGATG TCGGGACCGA
TAAGCTTTGG AACATCCTCA ACGATAGTTG TAGACCCCGT GATGTTGACG TTGAAGTCGA
ATACTGACGG AGCTTGCGAG GGCATGAGAC TAGGCTGAGC TGAAGGTACA CTACTCGGGA
CGGCTGAGGG GCTTGTAGAG GGTACAGAAG TAGGCATTCG TGATGGATCC GTAGACGGTA
CTGACGAAGG AGACATAGAA GGACTGCTGC TTGGTACCGA AGAGGGATTC TGGGAAGGGT
TCTCCGACGG AGAAGAGGAC GGTTGCACTG ACGGAACAGT CGAAGGCAAT GCGCTAGGAC
TGTTTGATGG CAGCAAGCTC GGCTGCGCCG ACGGGATAGC CGTTGGGTTT CCGCTGGGTG
TGGAAGAGGG AATGCTACTC GGCCTGGCAC TCGGCAACTC GGACGGGACT GCTGAGGGAT
CTCTTGAGGG TAGTAAGGAT GGACTCGCAG AGGGAATGGC AGAAGGAGCT GAAGTTGGTT
CGAGAGACGG CTGCGCCGAT GGCTGCTGGG AGGGTTGACC GGAAGGCAGG CGGGAAGGCA
CCAGCGAGGG GACACTGGAG GGATCTCGTG ATGGAGAAAC CGAGGGCAGT CGCGATGGCA
CATCCGTTGG ACTGGCTGAT GGTAGTCTGG ACGGGCTTTC CGATGGTGAC AATGACGGCA
TGGAGGACGC CAGGGGCGAC AAGATCACCC CGATGTATCG GATTGTGGAC GCAGTCTTGG
TATCCGCGTC ACCACCCGTT CCGTCGGCGG AACTGTTGTT TGGCGCCAGG TCCGAGTTAG
TAGCGTTCTC GGTGGAAACG ACTTCGACCT CAATACCGGC ACTTCCTAGA AACATTCCCA
CCAGGCCGAT TCGCGGTTGA AACTGCAGCA AGGTGGAATT CAAAAACAGA TCCAGCGCGA
TTTCGCGGAG TTCGGGCGTG CCGAGGGTCG AGTTCACCGT GTATACGCCG GAACTGACCT
CGGTAAAGGT TACGCCTGGA ACAGTTCCCA GCGGGACCAG TTCACCAATG AGGTTGCCGC
TGTCCATTGG TACCCGTAAT ATCACCGATA GAACTTCGGT GCCGTCCTGG TCGACACTAC
GACCGGGATT CACTCCGATC AAGCCAGGAG CGTTCTCTCG AAGGTTCAGC GGACTCACCA
CCGTGACTGT TACGTTGTCA GCGACCGCGA GGACCTCCAC AGGAAAGGGA AAGGTTTGGT
TGGAATTCGC ATTCATGGGA GTAGTACGTA CAGTGATATC CAGGATAAAG TCGGTGTCGG
ATTGCGGTGG GCCAGTGAGA ATAATGCTGT TCAAAACCGC TCGTATCTGG GCCTCGTTCG
CACCAGGTAC GTCGAACGTG CCTCCTGCTG GATTCACAAA CGTCGCTGTT TGGGTGTTAC
CTGCGGGATC TATGTACGTT AGCATTGTCC CGGGCGGAAT GCTGGAGATG ACAATGTCGG
CGATCTGGTC CGGTCGACCC GTGTCGATCA GTGAGACAGT GATGTCGGGA CCGATAAGCT
CTGGAACATC CTCAACGATA GTTGTAGACC CCGTGATGTT GACGTTGAAG TCGAATACTG
ACGGAGCTTG CGAGGGCATG AGACTAGGCT GAGCTGAAGG TACACTACTC GGGACGGCTG
AGGGGCTTGT AGAGGGTACA GAAGTAGGCA TTCGTGATGG ATCCGTAGAC GGTACTGACG
AAGGAGACAT AGAAGGACTG CTGCTTGGTA CCGAAGAGGG ATTCTGGGAA GGGTTCTCCG
ACGGAGAAGA GGACGGTTGC ACTGACGGAA CAGTCGAAGG CAATGCGCTA GGACTGTTTG
ATGGCAGCAA GCTCGGCTGC GCCGACGGGA CAGCCGTTGG GTTTCCGCTG GGTGTGGAAG
AGGGAATGCT ACTCGGCCTG GCACTCGGCA ACTCGGACGG GACTGCTGAG GGATCTCGTG
AGGGTAGTAA GGATGGACTC GCAGAGGGAA TGGCAGAAGG AGCTGAAGTT GGTTCGAGAG
ACGGCTGCGC CGATGGCTGC TGGGAGGGTT GACCGGAAGG CAGGCGGGAA GGCACCAGCG
AGGGGACACT GGAGGGATCT CGTGATGGAG AAACCGAGGG CAGTCGCGAT GGCACATCCG
TTGGACTGGC TGATGGTAGT CTGGACGGGC TTTCCGATGG TGACAATGAC GGCATGGAGG
ACGCCAGGGG CGACAAGATC ACCCCGATGT ATCGGATTGT GGACGCAGTC TTGGTATCCG
CGTCACCACC CGTTCCGTCG GCGGAACTGT TGTTTGGCGC CAGGTCCGAG TTAGTAGCGT
TCTCGGTGGA AACGACTTCG ACCTCAATAC CGGCACTTCC TAGAAACATT CCCACCAGGC
CGATTCGCGG TTGAAACTGC AGCAAGGTGG AATTCAAAAA CAGATCCAGC GCGATTTCGC
GGAGTTCGGG CGTGCCGAGG GTCGAGTTCA CCGTGTATAC GCCGGAACTG ACCTCGGTAA
AGGTTACGCC TGGAACAGTT CCCAGCGGGA CCAGTTCACC AATGAGGTTG CCGCTGTCCA
TTGGTACCCG TAATATCACC GATAGAACTT CGGTGCCGTC CTGGTCGACA CTACGACCGG
GATTCACTCC GATTAAGCCA GGAGCGTTCT CTCGAAGGTT CAGCGGACTC ACCACCGTGA
CTGTTACGTT GTCAGCGACC GCGAGGACCT CCACAGGAAA GGGAAAGGTT TGGTTGGAAT
TCGCATTCAT GGGAGTAGTA CGTACAGTGA TATCCAGGAT AAAGTCGGTG TCGGATTGCG
GTGGGCCAGT GAGAATAATG CTGTTCAAAA CCGCTCGTAT CTGGGCCTCG TTCGCACCAG
GTACGTCGAA CGTGCCTCCT GCTGGATTCA CAAACGTCGC TGTTTGGGTG TTACCTGCGG
GATCTATGTA CGTTAGCATT GTCCCGGGCG GAATGCTGGA GATGACAATG TCGGCGATCT
GGTCCGGTCG ACCCGTGTCG ATCAGTGAGA CAGTGATGTC GGGACCGATA AGCTTTGGAA
CATCCTCAAC GATAGTTGTA GACCCCGTGA TGTTGACGTT GAAGTCGAAT ACTGACGGAG
CTTGCGAGGG CATGAGACTA GGCTGAGCTG AAGGTACACT ACTCGGGACG GCTGAGGGGC
TTGTAGAGGG TACAGAAGTA GGCATTCGTG ATGGATCCGT AGACGGTACT GACGAAGGAG
ACATAGAAGG ACTGCTGCTT GGTACCGAAG AGGGATTCTG GGAAGGGTTC TCCGACGGAG
AAGAGGACGG TTGCACTGAC GGAACAGTCG AAGGCAATGC GCTAGGACTG TTTGATGGCA
GCAAGCTCGG CTGCGCCGAC GGGACAGCCG TTGGGTTTCC GCTGGGTGTG GAAGAGGGAA
TGCTACTCGG CCTGGCACTC GGCAACTCGG ACGGGACTGC TGAGGGATCT CGTGAGGGCA
ATAACGTTGG CAGTGCTGAA GGCAAGAGAC TAGGAAGCGA GGAAGGAAGT AGACTCGGTT
CCTCGGAAGG TTTCCAGGTA GGATCGGTTG ATGGGTTTTT TGAAGGCGAG ATCGACGGCA
ACCTTGTGGG G
 
Protein sequence
GFSDGEEDGC TDGTVEGNAL GLFDGSKLGC ADGTAVGFPL GVEEGMLLGL ALGNSDGTAE 
GSLEGSKDGL AEGMAEGAED GCTDGTVEGN ALGLFDGSKL GCADGTAVGF PLGVEEGMLL
GLALGNSDGT AEGSREGSKD GLAEGMAEGA EDGCTDGTVE GNALGLFDGS KLGCADGTAV
GFPLGVEEGM LLGLALGNSD GTAEGSREGN NVGSAEGKRL GSEEGSRLGS SEGFQVGSVD
GFFEGEIDGN LVG