Gene PHATRDRAFT_16490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_16490 
Symbol 
ID7198727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011694 
Strand
Start bp197103 
End bp197948 
Gene Length846 bp 
Protein Length281 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184913 
Protein GI219129474 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0436831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GAATTTATTC CCTTGCGTCT CCTCCGCAAG GACATTCTCA GTCACGATAC GCGTCGTTTC 
ACCTTTGCTT TGCCCAATCC GAAGGCCGTC CTCGGATTGC CCACCGGACA GCACGTCGTC
CTCAAGTGCA CGCACCCGGA CACGGGCAAG CCCGTACAGC GCTCCTACAC ACCCGTCACG
GATAATAGGG TCCTGGGGGA AATGGCTCTC GTGATTAAAG TCTACCGTCC CAACGATGTT
TTTCCGCAAG GGGGCACCAT GAGTCAGCAC GTGGACGACT TGCGAATCGG CGATGCGGTG
CTCGTCAAGG GACCCAAGGG ACACTTGAAC TTTTACGATC CCACCGTCGC CGCCTTTACC
GTCAAACCAC TCGGCAAGCC GCTGGAGTCA CGGACGGCCC GGAATATTTG CTTGTTGGCC
GGGGGAACCG GACTGACGCC CTGTTTGCAA ATCTTGCACG CCATTTTTCG ACACGAAAAT
AACGATAATA GTCACGTGTC CTGCAAAATG ATCTACGCCA ACCAAACACC GGACGATATC
CTGTGTCGGG AAGAACTCGA GACACTCGCC CGGGCGTTTC CCACAAGATT CCAAGTGTGG
TATACCGTAG ATCGGACGAC CACGGCTATG CCCACCAGCA ACGGGTCAAC CAAGGAAGCG
GAAGAGACGT GGGCTTACGA TGTCGGCTTT CTCAATAAGA AGATGATCGA AAAACACGGA
CTGTTTCCGG GACAAGAGAG CTCCACGCAA TTTTTCATGT GCGGACCACC GCCCATGATC
AAGTTTGCCT GTTTGCCGGC CTTACAGGAA CTGGGATTCT CGGAAAAGGA TTGGGTAATA
TTCTAG
 
Protein sequence
EFIPLRLLRK DILSHDTRRF TFALPNPKAV LGLPTGQHVV LKCTHPDTGK PVQRSYTPVT 
DNRVLGEMAL VIKVYRPNDV FPQGGTMSQH VDDLRIGDAV LVKGPKGHLN FYDPTVAAFT
VKPLGKPLES RTARNICLLA GGTGLTPCLQ ILHAIFRHEN NDNSHVSCKM IYANQTPDDI
LCREELETLA RAFPTRFQVW YTVDRTTTAM PTSNGSTKEA EETWAYDVGF LNKKMIEKHG
LFPGQESSTQ FFMCGPPPMI KFACLPALQE LGFSEKDWVI F