| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49924 |
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| Symbol | |
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| ID | 7198535 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011693 |
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| Strand | - |
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| Start bp | 311504 |
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| End bp | 315142 |
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| Gene Length | 3639 bp |
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| Protein Length | 564 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184777 |
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| Protein GI | 219129188 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTAATGGCCG GATCGGTGTC GCCGTTGTAC ACCAGCACGC GAATTTTCCC ATTGATGCTT
CGGTAAAAGC CGCTCAAATC TGGTTCGGTG GGGGTGTAGT CGAAATCGCC GTCGGCATTG
TCGACGGAAA AGAAAGTTGC GTTGGTCACG TGCAGGGCTT CCTTGACCAC TGGCAAGCTA
AGATAATGTT GCATGACAGC GTCGCCTCCG CAGGGGTAAT CGTTCAGTGC TCCTCCGAGA
AGACCACCGC TGTACGTGCA TTCATCGTAC AAGGAATATC CGTAGTAGCC ACCTACTTGA
CGATCTACCT TGGCGAGGGC GGCTTGACAT ATATCGCTGT CCTTGAGAAA GCGATAATTC
TCCTCATTGC TCGAAAAATC GTCCGCTGAG GACGCTGACT GAGGCGACAA AGGATGTTTG
TGTGGACGGC AAGCGTGCAT GACTTCCTGA AAGGTTGCCA TGGGCATTTG ACCGTGACCC
GCGAGAAATA AAATATTCCA AATATCAATC GCATCGGGAT TGGAAAGATC ACCACAGATG
GAAGTTTCGG TTCCGAGACA TCCGTCACCG ACGGCCAATC CTTTCAACGG AATGTGATTT
TCCGGATCTT CCAAAATTCG CCGTGCGAGC GTGGGAATGT AGATGCCAGC ATAGGATTCT
CCGGTCAGAT AGAGCTCGTT GGTACCGTAG CATGGGAATT TTTCGTGAAA GGCCAAGAGC
GCCAGATGAG CGTTTTCCGC CGCGAGTTCG TCCGTCCAGG CCAATCCAGC GCAGGAATGC
GAATCAACGT CTTCGTTGCA GTAGCTGAAT CCTACCGGAG CGGGTTGATC GATAATCAAA
ACATGTCCCA GCCTTGTCCA CGCGCACGGG TTGTAAATGG GTGTAGGAAT TCCCGTGGCT
TCGTACTCGG CAGTGTGGAG TGATTCGTCG CTGAAGAGCA ACGGCCCTAG TTCCGTCAAG
AGTCCGAAGA GAGAGCTCGC ACCGGGACCA CCATTGCTCC AGTAAATTAA AGGCTTGTTC
TTATGGAAGT CTTCTTCAGC CTCGACGAGG ACGTAATGTG TGTGGACCGT GCGGCCCTCG
AGTTCATACT CGACAAAGCC GGAATACCAC GGTGACGGCA AGGGCTGATT GAACCCCGGC
AGACGCGAGA CAAAATCGGG ATTGGAGGAG CCCAAGCACG CCAACGCGAA CGCCAATTTG
GACACGAAGA AGGCTACAAA TGTTGATGAA CGAAATTGCA TCATGCTCGG TTTGAATGAC
TGTGAGTTGG ATCTTACGGA ACTGCAGAAA GAGAATTCGA TGCAAGCGGT CGATGGAGTT
TGCGTTTTGC ACACCACGAC GAGGCAGTCA CAGTCACAGT CAAATCGGAT TTGACGGTTT
CTTTAGAACC CGGATATAAG AGGGATCCGT CCGTGACGGA TAGACAGACG GAAAAGATCG
ACTCGCTGTG TTTGACAGCG CAAGTGACTT GTCTTCTCGA CCCAAAACGG GAAGCACGGT
TTGAAATTCG AACAAATTCC GCGGATCTTT CCGAATTTCG GGTTGGAGCG AACAGCTTCT
CGGAACGTCG CGCATCGCTC GAGGAGGTAC CATTGGATGG TCCCCGGTGC CTTCGGGTTG
ACACTGACAA CCGACGTCCG TGCTCTTGCG TTCCTTCCTT ACAGTCAGCA CAAGCTTCCC
CATTTCCGTG AGCGTGAGGA TTGCCCCACA GGCAAAAGAC TAGCCATTCA CTTTTCAGGG
TTGGGAGCCG TATCATGCCG GATTCTAGCC AACGTGACGA CGAGGCTTGT ATGCGGGAGG
CGATTGCCGA AGCGGCGGCG GCGACATCCG AAGGGAAAAT GCCCTTTGGG GCCGTCTTGG
CTATCGACAG TGTCATCGTC GCACGAGCTC ACAATCAGTG TCCGGCGGCT GCCAAACGAG
GGGGTGGAAC GGGCGACGTC ACCCGACACG CCGAAATGGA ACTCGTTCGA CTCTTCACCA
GCAAACTCAC CGCGGAAGAA CGATCCAACG CCGTCCTCTA CACCAGTACC GAGCCGTGTG
AGTGCAATAC AGACGTGTCA AATGTGTCAG ATTAACGGCG TGACTAATGT TATATATTTA
CTTTCTTGTC TTGCTCACGT CGGGGTCTTT GGATATCATG TTAGGTGTCA TGTGTGCGGG
AGCGATTTAC TGGAGCGGTG TTTCCAAGGT TGTATACGGA TGTTCGGCGC GACAGTTAGA
GGCCTTGAGC GGTCCGGGCG GCTTTGACAT ACCCGTCGAC ACGCTCTACG GAATGGCGTC
GAAGGGAGCG CGACGAATGG AATGTCTTGG TCCCTTGCTG GCGGAAGAGT CCCTACAGGT
TCATGTCGAT TCCGGTGTCT GGAAGAATGC ACCGGTCCCT ACTACTGCGG AATTTCCCCC
CGTCACCCAG GCGGATCTAG ATATTGCGGT CGAGGCCGCC CTACTGAAAA GCGGCTTGGG
GTCCGCCAAG GTCGTCGACG ACGGTGTCGT GCCGGTCATT GATCTCTCCG TTGGCACGGA
CGAGCAAGTC GCCGAGAAAC TGTGGCAAGC GGCCATGGAG GTTGGTTTCT TCTGCGTGGT
TGGTCACGGA ATCGACCAAT CCATTATTGA CGGAGCCTTT GGCGCCTCGG AAACTTTCTT
TGCGCAGCCG CTCGAAGACA AGAAAGCACA ATCACCTCTG GATATGAGTA TCAACTCGGG
TTTCGAGTAC TTTGCCCAGG TCCGCCCGAG TACCGGCGTA GCGGACCAAA AGGAATCACT
ACAAATCACG GCCCGCCAAG GCTGTATGGA CGATCGCTGG CCGTCGGACG AATTCCACAA
GAGTGCCGAT GCATTGCTCG AAGCATCGCA CCAGTTGGCC AAGCGAATTT TGAACCTGTT
GCAACCCCAA GCGATTCCCC ATGTGGAACC GGAAACGCTG GCGAATTCGC ACACGCTTTG
GGAAGAAGAC GGGCAGTGTA CCTTACGATT CTTGCATTAT CCCCCACTGG ATAGTGACAC
CACGGCCAAG CTCATTGACG ATGGCTATTG GCGGGCGGGA CCGCACACCG ATTGGGACAA
CGTAACGTTA CTCTATCAAC AAATGGGACA GAATGGTTTG GAATGCTGTG CCAATCCACG
GACAGGCGAC CCCGCTTCCA TGTACTGGAC AGCCGTGAAT CCAGTGGAAG GAGGGATCGC
CATCAACGTG GGTGATATGC TGGCACGTTG GAGCGACGGC AAGCTCTTCA GCAACCTGCA
CCGCGTACGT CTACCACCCG ATGCGTCCAA ATCGAGATAT TCCATCGCAT TTTTCGCCCA
GTCCGACAAG AAGGCTCTGA TTGAAAGCAA GGAGTCGGAA CCGATTACGG CTGGCGACTA
CATACTTTCG CGAATTCGTA GCAACTTCGA TAAGAAGTAG ACTTCCCACC GTTAAGATCG
CTTTCGTTTG TTGAATATAT ATTTTTATGA TTTTCTCATA CCAAGCTCCT TCCTTACAGT
CGAACAACAC CTATGTTGAT CGCCATTGCT GCAAAGTATA GGAGTCTGAT TGGTTTGGAA
GCCCAGCGCC ACAACTTCGA ACTCAAAAAG GAATTGCCGT CCGAGGGGCT GTATTATAAA
TTGATGAGTC CGGAAAACAT GTTTCGAAGC TTTGCATAG
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| Protein sequence | MPDSSQRDDE ACMREAIAEA AAATSEGKMP FGAVLAIDSV IVARAHNQCP AAAKRGGGTG
DVTRHAEMEL VRLFTSKLTA EERSNAVLYT STEPCVMCAG AIYWSGVSKV VYGCSARQLE
ALSGPGGFDI PVDTLYGMAS KGARRMECLG PLLAEESLQV HVDSGVWKNA PVPTTAEFPP
VTQADLDIAV EAALLKSGLG SAKVVDDGVV PVIDLSVGTD EQVAEKLWQA AMEVGFFCVV
GHGIDQSIID GAFGASETFF AQPLEDKKAQ SPLDMSINSG FEYFAQVRPS TGVADQKESL
QITARQGCMD DRWPSDEFHK SADALLEASH QLAKRILNLL QPQAIPHVEP ETLANSHTLW
EEDGQCTLRF LHYPPLDSDT TAKLIDDGYW RAGPHTDWDN VTLLYQQMGQ NGLECCANPR
TGDPASMYWT AVNPVEGGIA INVGDMLARW SDGKLFSNLH RVRLPPDASK SRYSIAFFAQ
SDKKALIESK ESEPITAGDY ILSRIRSNFD KNRTTPMLIA IAAKYRSLIG LEAQRHNFEL
KKELPSEGLY YKLMSPENMF RSFA
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