Gene PHATRDRAFT_49907 details

Gene Information

• Locus tag: PHATRDRAFT_49907
• ID: 7198608
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011693
• Strand: +
• Start bp: 261322
• End bp: 263556
• Gene Length: 2235 bp
• Protein Length: 624 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002184683
• Protein GI: 219128991

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.111803
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TCGAAACAGC CTTCGCACTT TCTACCACAA CTAGCGGTTT GCGAGATCCG TTTGTGTATT 
TTTTTTTCTA CTCTTTTTCC TTCGGCTATT CTCATATTCA TTGCCATTGT CATTGACTCC 
GTCCACACAC AAATCACACA CACACACATT CACCTTCACA GTCCCAAGAA TGTCCCCCAG 
CATGGAAGTG ATGAACAACA GCATGTCGGG AAACCATCCT CCGCACGACA ATTACCTTTG 
CCGCGGTCCC GAAGACTTTT CCGAATCGAG TGAGGCGAAC AACAGCGCTT CCAGCAACCC 
TCTCGGTTTG GATTCGGCTC CTGTCGTAGA AGGCGATCAC GAGATCATAA ACGATGAAGA 
CGACGACAAT AACAACAACG ATTCCCCAGC CCAACAGGTC TCGAAACCCG GTCTACACGA 
CGTGTTGCTG GGTCGCGGGG GCGGTACCAA CAATCACCAA GGCAACGTCT TCTTCCGCAA 
GCTCGTGAAC GAACACAAGA TGCGCTATCT AGCGTGCTCC AAGGTCGACA AGCCCAAGGT 
TGCCCGAGAA GTCGTGTGCT TGTGGCGGAA ACTGACTCCT CCCGGGCGTT TCTTGTCGCG 
CCACGAAGAG GCTCGGCGGG GACCGGGATC CGTCAAGGCC GCGGATACCC TTTGGTACGA 
AGTCGGCGAC AAGAAGGCCC GCGAAAAGGC GTCCCAATGT TTGCGTGAAC GCACACCCGA 
CGTTCTACCC TACATTAAGC AATTGCGGGA GCAACAAGAC GCCATTACGG AACAGGGTGT 
CTCCCTCGTG CAACAACAAT TGCAAATGCA ACAACAGCAA GGCCGGCGGC ACGAACACCG 
CCACCAACAA GATCATCAAC AACAGCATCA ACACCCGAGC TTTACTTCGC ACAACACGTC 
ACTGCACGGA CCGGCCTTTC CGCGTCGCAA TTCCATGCCC GTCCCGCACG AATCGTTTCA 
ACAGCGACCT TCGATGCCTT CGGGACCAAC GATTGGTGGC GCCATGGGGG GTGCCAGGAT 
GCGCGGGAAT CACTTGGGTG GTTCCAGCCG GGTGGTGGTG GAATCCGCCG GTACCAACGA 
ATCCTTTGGC CGCTGTACCT CCTTACCGTC ACGATCGTAC CTCATGAACA ACTCCGATCG 
CGGCTACTAC AACGATTTGC CCGTCGAGGA CGAGTTCTAC CGGACTACCA ACCCCTCCAA 
CGGGGATCAC CTTTCCGAAC TCGAGTACCA GCACAACATG ATGCTCATGC AGCAGCAGTT 
GGAAATGCAA CAGATGCAAT TAGAGCGGTT GCGTGCGCAA CGAGCCATGC AACAACGAAT 
GCACGCTTCC GAATCCAGCA TCTTCGACAC GGCCCCCTCA CAACCAATGC GACACGGATA 
CAACGCCAAC AACAACAACA GTCATCGGCA CAGTAGTATC CATGGGGACG ATTTCTTTGA 
AGACCAGCTG CACGGGGACT TTCAAGATCC GCTCTTGACC ATGCCGGCAC AGCCGGTTTC 
GCACACCGCC GCCACGATGC GCCGGATACC GGGCGCCATC AAGCGCTCGC GCGATGAGCA 
CGTGATTCGG ACCAGCCACA CACTACCCGA CACGGCCACG TCCCGCAACG GCAACAATAC 
CACCGAAAGT GGAGAACTGA CCTTGGAAGA ATACCGTCAA CAACTGGAAG ACTACATCAT 
CAACAGTCAC CAGCAGCAGC AGGAACCGCA CAGCCGCGAC GGTGTTCTGG CAGTGGCACC 
GGACATTGAT GACGAAGAAC TCGAAGATGA TTGGGAAAAG GAGAAGGAAA AGAACTACGC 
TGAGCAGCGA TCACGCGGCG TTGATCGTAA CGCTTCCGGG ATGTCCATGA TGAGTGCCAA 
GACCACCAAG TCCAACATGT CCATGGTCTC GGGCTTTTCC GGAATATCCG ACCTCATGAG 
TCAGGATCGC GAAACCAAGA TGAATTTGAA TCGCAACCTC TCCTCCAACT TGTCTCTCAT 
GTCGGATATG ACGGATTTGT CGCAAAATAT TGATACGCTC AGTATTTATG ACGAGGAAAA 
TTAAATGACC CGTGGGCATC CGCACATCCG GGCGGTCTTC CCCCTCTCTC CCTTTTTCGG 
GAAAGGAAAG AATTGGAGTG GGACCCGGGA GTGCGGAATA GATCCAATCT TTATGTTAGT 
CAGCATTTAT GACGCATTTG CCTTTGCAGT TGCCTTTTAC GTCACATGTT TCATAATGAA 
CAACATTTTC CATCT 

 

Protein sequence

MSPSMEVMNN SMSGNHPPHD NYLCRGPEDF SESSEANNSA SSNPLGLDSA PVVEGDHEII 
NDEDDDNNNN DSPAQQVSKP GLHDVLLGRG GGTNNHQGNV FFRKLVNEHK MRYLACSKVD 
KPKVAREVVC LWRKLTPPGR FLSRHEEARR GPGSVKAADT LWYEVGDKKA REKASQCLRE 
RTPDVLPYIK QLREQQDAIT EQGVSLVQQQ LQMQQQQGRR HEHRHQQDHQ QQHQHPSFTS 
HNTSLHGPAF PRRNSMPVPH ESFQQRPSMP SGPTIGGAMG GARMRGNHLG GSSRVVVESA 
GTNESFGRCT SLPSRSYLMN NSDRGYYNDL PVEDEFYRTT NPSNGDHLSE LEYQHNMMLM 
QQQLEMQQMQ LERLRAQRAM QQRMHASESS IFDTAPSQPM RHGYNANNNN SHRHSSIHGD 
DFFEDQLHGD FQDPLLTMPA QPVSHTAATM RRIPGAIKRS RDEHVIRTSH TLPDTATSRN 
GNNTTESGEL TLEEYRQQLE DYIINSHQQQ QEPHSRDGVL AVAPDIDDEE LEDDWEKEKE 
KNYAEQRSRG VDRNASGMSM MSAKTTKSNM SMVSGFSGIS DLMSQDRETK MNLNRNLSSN 
LSLMSDMTDL SQNIDTLSIY DEEN