Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49897 |
Symbol | |
ID | 7198523 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011693 |
Strand | + |
Start bp | 229320 |
End bp | 230341 |
Gene Length | 1022 bp |
Protein Length | 236 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184677 |
Protein GI | 219128979 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.626746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CGCTCGTTCC GTGGCGTAAC GAAGCAAATC AGGATTGTCG TAAATAGTCG GTTCCAATTC TTTTCCTCTT TCTGCATTCG TTGGTAGTTT TGTTCCTCAT CCATACATCC ATACACATCG TATAGAAAGA AACTATGGGT GATTCGGCGT ATTCCTTTTC GTTGACGACG TTCAGTCGGA CGGGGAAATT GTTGCAGATT GAATACGCTT TGAACGCCGT TGCCAACGGG CGCACGGCGC TGGGCATTTG TGCCAAGGAC GGTGTGGTGA TTGCGACCGA CAAGAAATTG CCTTCCGTTC TGGTAGATAC CGCACACGTA CACAAAATGG AAACCATCAC ACCCACGACG GGATTCTGTT ACTCCGGCGT AGGACCCGAT TATCGAGTTC TGGGTACGTA CCCAAGCGGC CCGCTTGGTT GTTTGAAAGG TCTCGGGGTT CGTCACCGTG TGGGTAGGCC CGTTGGTAAC TGCACCCAAA CGGGCTACCA CAAGACGCTC TAGCTGTGCT ACTGCTACTG TTGCTATACA CACTGCTCAC ACTCGTCTTG TTCCCTTCTC GCGGTCACAG TCAAGCGCGC ACGCAAGTCC TCCCAGGCCT ACGTGCGCAT GTACGGTGAC ATTGAGCCGA TTTCCCAGCT CGTCAAGTCC ACAGCCGGCG TTATGCAAGA GTACACGCAA CGGGGCGGTG TCCGTCCCTT TGGTGTTTCA CTACTGGTCG CCGGTCTCGA TGGTGACGGT CGTCCCGGTT TGTATCAGGT AGATCCCTCC GGAGCCTACT TTGGCTGGAA AGCCACGGCA ATTGGCAAAA ACTTCGTTTC GGCCAAGTCG TTTTTGGAAA AGCGTTACAG TGACGATATG GAACTGGAAG ACGCCATTCA TACGGCCTTG CTGACCTTAC GGGAAGGATT CGAAGGCGAA ATGAGTGCGG ATAACATCGA AGTAGGTATC GTCAAACAGG ACGGCAAGTT CCAAGTCCTG ACTCCGGAGC AAATTCAGGA CTATTTAGAC GAAGCAACCT AA
|
Protein sequence | MGDSAYSFSL TTFSRTGKLL QIEYALNAVA NGRTALGICA KDGVVIATDK KLPSVLVDTA HVHKMETITP TTGFCYSGVG PDYRVLVKRA RKSSQAYVRM YGDIEPISQL VKSTAGVMQE YTQRGGVRPF GVSLLVAGLD GDGRPGLYQV DPSGAYFGWK ATAIGKNFVS AKSFLEKRYS DDMELEDAIH TALLTLREGF EGEMSADNIE VGIVKQDGKF QVLTPEQIQD YLDEAT
|
| |