Gene PHATRDRAFT_49897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49897 
Symbol 
ID7198523 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011693 
Strand
Start bp229320 
End bp230341 
Gene Length1022 bp 
Protein Length236 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184677 
Protein GI219128979 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.626746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGCTCGTTCC GTGGCGTAAC GAAGCAAATC AGGATTGTCG TAAATAGTCG GTTCCAATTC 
TTTTCCTCTT TCTGCATTCG TTGGTAGTTT TGTTCCTCAT CCATACATCC ATACACATCG
TATAGAAAGA AACTATGGGT GATTCGGCGT ATTCCTTTTC GTTGACGACG TTCAGTCGGA
CGGGGAAATT GTTGCAGATT GAATACGCTT TGAACGCCGT TGCCAACGGG CGCACGGCGC
TGGGCATTTG TGCCAAGGAC GGTGTGGTGA TTGCGACCGA CAAGAAATTG CCTTCCGTTC
TGGTAGATAC CGCACACGTA CACAAAATGG AAACCATCAC ACCCACGACG GGATTCTGTT
ACTCCGGCGT AGGACCCGAT TATCGAGTTC TGGGTACGTA CCCAAGCGGC CCGCTTGGTT
GTTTGAAAGG TCTCGGGGTT CGTCACCGTG TGGGTAGGCC CGTTGGTAAC TGCACCCAAA
CGGGCTACCA CAAGACGCTC TAGCTGTGCT ACTGCTACTG TTGCTATACA CACTGCTCAC
ACTCGTCTTG TTCCCTTCTC GCGGTCACAG TCAAGCGCGC ACGCAAGTCC TCCCAGGCCT
ACGTGCGCAT GTACGGTGAC ATTGAGCCGA TTTCCCAGCT CGTCAAGTCC ACAGCCGGCG
TTATGCAAGA GTACACGCAA CGGGGCGGTG TCCGTCCCTT TGGTGTTTCA CTACTGGTCG
CCGGTCTCGA TGGTGACGGT CGTCCCGGTT TGTATCAGGT AGATCCCTCC GGAGCCTACT
TTGGCTGGAA AGCCACGGCA ATTGGCAAAA ACTTCGTTTC GGCCAAGTCG TTTTTGGAAA
AGCGTTACAG TGACGATATG GAACTGGAAG ACGCCATTCA TACGGCCTTG CTGACCTTAC
GGGAAGGATT CGAAGGCGAA ATGAGTGCGG ATAACATCGA AGTAGGTATC GTCAAACAGG
ACGGCAAGTT CCAAGTCCTG ACTCCGGAGC AAATTCAGGA CTATTTAGAC GAAGCAACCT
AA
 
Protein sequence
MGDSAYSFSL TTFSRTGKLL QIEYALNAVA NGRTALGICA KDGVVIATDK KLPSVLVDTA 
HVHKMETITP TTGFCYSGVG PDYRVLVKRA RKSSQAYVRM YGDIEPISQL VKSTAGVMQE
YTQRGGVRPF GVSLLVAGLD GDGRPGLYQV DPSGAYFGWK ATAIGKNFVS AKSFLEKRYS
DDMELEDAIH TALLTLREGF EGEMSADNIE VGIVKQDGKF QVLTPEQIQD YLDEAT