| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49892 |
|---|
| Symbol | |
|---|
| ID | 7198518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011693 |
|---|
| Strand | + |
|---|
| Start bp | 213789 |
|---|
| End bp | 214610 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184672 |
|---|
| Protein GI | 219128968 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.254888 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACTG TCAATGAGAA AAGATCCCTT TCTGGACGAA TGTTGCATGC GATTCTTGGG
TTGTCACTGT GTATCTCGTA TGCAATAGCT TTCTTGGATA CTGGCGGAAA CAGCTTTTCA
CGATCAAAAG TCGTGATCGA ATCGTCGCGG CGCCCGAAAG CCACATCTGC TTCAACAAAT
ACACGTCGAC AAGAACTTCT TTCACGCAAT GGACCTCACT TTAGGCTCGA TCGCTTCAGA
GGAAAAGTAG AGTTTGGCGC TACAGCGAAG CTTGTAACCG AGCTCGGTTC CGGCGCCAAT
AACGAATCTA TCTCGACTTG GCTTCGCGAT GAACGTGGAT TGGCTCAATC GATCTGGGAC
CCTTCTCTGA TAAAAGACCT CGGAAATTCT ATTTACAGGC TTCAAGTTAT GAAGCTTCAG
TTTGTGACAT TGCAGCTGGC GCCTTGGGTC GATGTTGAGA TGAGCACTAT TCAAGGAATA
GACGACTCTC CTGTTTTTGT TCTGCAATCT GTCGGGTTTG ACCCCAATAT TGAAGTCCTT
CCTGGAATGC GAGTGTCAGC AGACGCCCTC GGTATCTTGA TTGAAGTATC TGGGGAGCTG
AGGGCTTCTC CTGATGGTAG AGGCGTGGCA GGAGGAGTTG CTTTCCAGAC ATCGGGGGAA
CTTCCGCCCC CGATGCGCGT ACTACCCGAG GCGGCACTAA AGGCTGCATC CGACGCGATC
AACCAAACAA TTGTCAGGTT TGCAGTCCAA AGCTTTCAAA AGGGAGCTAC GGCAAATTTT
AAAGCCTTTT TGAGGTCCAA GTAACGGCTC TATTTTATGT GC
|
|---|
| Protein sequence | MFTVNEKRSL SGRMLHAILG LSLCISYAIA FLDTGGNSFS RSKVVIESSR RPKATSASTN
TRRQELLSRN GPHFRLDRFR GKVEFGATAK LVTELGSGAN NESISTWLRD ERGLAQSIWD
PSLIKDLGNS IYRLQVMKLQ FVTLQLAPWV DVEMSTIQGI DDSPVFVLQS VGFDPNIEVL
PGMRVSADAL GILIEVSGEL RASPDGRGVA GGVAFQTSGE LPPPMRVLPE AALKAASDAI
NQTIVRFAVQ SFQKGATANF KAFLRSK
|
|---|
| |