| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49888 |
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| Symbol | |
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| ID | 7198516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011693 |
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| Strand | - |
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| Start bp | 201997 |
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| End bp | 203465 |
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| Gene Length | 1469 bp |
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| Protein Length | 400 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184752 |
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| Protein GI | 219129136 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000833152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTCGTTACTG TTAGTAGGGT ACCTTCGATA CGAAAGACTA TGAGAGCGTG TAGGATAGGA
CGCTTCGCTA TGGTCAGGCG AGGGAACCCC CTCCTGTTTG TGGCTTTCGC AGCGACAAGC
AAGGACGACG CACACTAGCT TTCTTTTCCG TAGAAAATGG TTCCGGTCAA TACAACGCTA
CATCAAATAT CCCCTTGACC AAAGCCAACT TTTTCACAGC ACGGTACAAA AAGCATCAAT
ATCAGCCACT CGCTATCAAT TCGCGCATGC CGTCCAACCA AAAGCACCTC AAGCTTTCGA
AGACTCGTGA CAGTGATTCC AACAAGAATA TCGACAAGGT CGCCTCGGAA GAGCAATTTG
CGGCGAGTTC TCAAATCGAT CCCGAGTCCA CCACACCGTG CGTGTACATC ACTCACGTCG
ATCCACATAC GACAACGGAG GGGCTGGGAT CCCACGTCCG TGGAACCATC TATCCCTTAC
TGCATCTGGC TCACTACTTG TCCATCGTTC CGGTATGGAA CGTTGCAACC AGCGCTGGAT
TTTGGCAATC AAAACGATCC GCCAACACAG AAGATTACAG TCTCCTCGAT CTAGCCGAAC
TCTTTGGAAT TGGTGAAACG ACGGCAAGCT GGGATGATAA GGATAGACTT CTCGATGTAC
ATACGTGGGT GGATCCGATT ATAGGCAACG CCTACGGCAA GGTGGAAAGT TTAAGTGAAT
TGCTCGAATC TTATTTACAT TCAATCGCAC TCCACCAAAA GCCTCGATGG ATACGAGTGC
ATGGTGCCTT TTCTTACCAG AATCCAACTC CAATGGTCTA CCGCCATTTG CAACAAGCAA
AGTCCTCTTG GAAAGACAAG CGCACAAACA ACGACACAAA TGACAGCTTT AAAACAGACT
CGTCTATGAG CGATCCTCTA CGAATAGGTG TTCATGTGCG CGTTCCGGAA GATTGGTGCG
GAAATCAGTG GAAGGAAGAC AATTACGTAT CGCACGTAAT TGAAACGCTC CAAAGTTTGC
AACGAAGTCT TCCAACAGGA GCTTGGGAAT GCGTCGCTTT GAACGTTGTT TCGGAAATCG
CGCTAGAGAC GTCTGGCCAA GCGGCCGTAC TACGGCAGGC CTTCCCTCAG GCCACCTTTT
CTCTGGGCAA TCCGATTGTG AACGAAATTA AGCATTTGGC TCTGTCCGAC ATCTTTCTTC
CAGCCGCATC ACATTTAAGT GCGTTGGTGG GCTACTTTGT ATCCCCTCAA AACAGCTTGA
TTCTCTTACC CGTTCGAAGA AATCGGTGTC CGTATTTGGA ACCGCACATT GCGCTGGGCG
CGCCAGTGAT CGTGGCGGAT GGGGACAATC AATCCTTCGT CGCCGCCCTT CAGATACTTT
GGAGGCGCAA ACGGAATACG CCGTCGCGGT CAAGATCGCA TGGTACAATT GGAGATTGTG
AAGAGGGCGA AAAAACCACT TCGCAGTAG
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| Protein sequence | MPSNQKHLKL SKTRDSDSNK NIDKVASEEQ FAASSQIDPE STTPCVYITH VDPHTTTEGL
GSHVRGTIYP LLHLAHYLSI VPVWNVATSA GFWQSKRSAN TEDYSLLDLA ELFGIGETTA
SWDDKDRLLD VHTWVDPIIG NAYGKVESLS ELLESYLHSI ALHQKPRWIR VHGAFSYQNP
TPMVYRHLQQ AKSSWKDKRT NNDTNDSFKT DSSMSDPLRI GVHVRVPEDW CGNQWKEDNY
VSHVIETLQS LQRSLPTGAW ECVALNVVSE IALETSGQAA VLRQAFPQAT FSLGNPIVNE
IKHLALSDIF LPAASHLSAL VGYFVSPQNS LILLPVRRNR CPYLEPHIAL GAPVIVADGD
NQSFVAALQI LWRRKRNTPS RSRSHGTIGD CEEGEKTTSQ
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