Gene PHATRDRAFT_49883 details

Gene Information

• Locus tag: PHATRDRAFT_49883
• ID: 7198596
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011693
• Strand: +
• Start bp: 184820
• End bp: 186941
• Gene Length: 2122 bp
• Protein Length: 554 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002184667
• Protein GI: 219128958

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0580309
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAGTGACCCT CCCTTGTGCT TTTTTGTTCG TTCAATTCAC TGTTACAAAG TTCAAGTCTT 
TCGAAGGCTT TCCGCTCATT GCGTGTTCTT ATTGCCCTCA TTCATTATGC TTGCCAATGT 
CGATTCTGGC ACGGCCACGA AGGCGACATT CGGCAGGTTT CGTTCAAACC GGCACCCCAC 
TAACAGAAAG CAACTTCAGC GTGCGGCTAC GTCGCGATTC ATCGCTCTTT GTGTGATGAT 
GCTGGGTATG GGGTCCCTCT GGCAATCCCG ATCTATACTT TCGTTGGTAC TCTCAACATC 
TACCCAACAG GAGTCTGCAA TTGATGCCAT TCGCACCGAC GTGGTCTCCA ACAACATTGA 
CACCGGCACC AGATATGAAA AAGACCCGAT GCAATTTGCG GGGAGCTTGC AATCAGGAGG 
CAGCGCTGGA AAGACCAAAG ATAATACAGA AACGCCAGTG ACAGCCGCCG AGCGAGAGCG 
TTCAGTGCTG GCCTTAGAGC CACCCCCAAC GAAGGTTACG GTCGAGGCGG ATGATCCGTC 
AAATGCTGGC AACGAAAGTG AAACGACGTT TTCGTTGATG CAGCGTATCG AACATACGCC 
TCGAAACCTG ACCAACATCC CAAAAATGCG AGTAGTACTT TGGCCTGACA CGCAATCAGG 
CGTTCGAAAC TCTGAGAGTT TTCACCTGAC GGAAAACGGT ATCAACGAGT CTGCCTATTT 
AACGCTGAGC AACGAGACAT GGGACTTTCA TTCCAATGTT GTGTGGGTGG GGGATATGGG 
AATGGGTGGC CCTCGAAGAC AATGGTGTGG AGCTTTTGGG GCACTGGCGA AACAGGCCAA 
AGACAAACGG CGTGTATCAA GACTCCCATT GCAGTGGCCT ATTTGTATTG TTGACTACGC 
TGACGGCCCC TCATTGCCAC GGTGCGCGAA TATCGAGGCG CAAGTAGGGG TTGAAAATGT 
TCGGTATTCC GTTCGATCCG TAGTGACTGG ACGTAATTGG AATGAAACTA TCGGATGGGT 
ACAAGGCGGT GGTCGACTAA GTCTGAATAA AACATATGGT ATCACATATC GGCAGGCATC 
GTATATGGTT CGGACAGACA TGATCAAAGT CTTGGAAAAC TCTCTTCGAG CGAGAAATAT 
GAGCCTGGCC GATCCAATTG AGCGCATCGA TCGGCCGGTT GATGTTGCCC ACTTCTGGCC 
CCACTCAAAT TCATCGACAA ATCAACAAGA CCGACGCAGT GTGTTACATT TCCGATCCAA 
GCTACGTTCC AAGATTAGCG ATCTGGTCGT TGATCTTGGC AAGACCCAAT CAAGTCTCAA 
CGTCTTTGTT GGTCTCAAAG GGCACGCAAA GGAGAGTGGA CGCACTGGAG TGCACACCGA 
CTACATGAAT GCTCTACTTG CTTCAAAGAT TGTCGTGGTG ACACAACGAG ACGAGTGGGA 
GGAACACTAT CGACTTATGG AGGCAATCAT TGGCGGTGCC ATGGTGATGA CGGATCGCAT 
GCTGACGTTA CCAGCAGGCC TGCAGAACGG CACGTCCATA GTCGAGTTTG ACAGTGCCGA 
GAGTCTCGTG TCACTGATCA GCTACTATCT GAGACATTCT GATGAGAGGC TGGAGATAGC 
CCGGGCAGCG CGGGACGTCG CTTTGCGAAA GCATCGTTCT TGGCATCGGA TGGAAGAGAT 
CATCTTTGGT GAGAGTCTGT CAAATTGCAG CTTCCAGCAC CCAAATAGCC CGTGCCCGTA 
CGTTGCTCAC GGCATCGATT CAAAGCGTTA AAAAGACATG CGCGAAAAGT TTCCAAAAGG 
AACGGAGCTT GTAAAGGGTC TGTTTATGGT TGTTGGCAAA GAGCCTTAAG ATATGGCTTT 
GAGATACTGT GTGCACGAAA CTGATAGTGA CGAAAACAGA AGCAGCAATT TGTCTCCAAT 
GTACATTTTA CAGCGGAACG GACTTAGCTT GCTTGAGGTG TCTATAGGCG ACGATTGCAA 
TCTATTGAAG TGTTGGAAGG AGCCATTTAC TGTTAAGCAC ACTGATATAT GTCACACAAT 
GAAGATCACT TTTTTCAAGC AACGAGTTGT CAAAATAACG AAACAAAAAC TAATGTTGTG 
TCTAAAGCTT GATATTTATT TT 

 

Protein sequence

MLANVDSGTA TKATFGRFRS NRHPTNRKQL QRAATSRFIA LCVMMLGMGS LWQSRSILSL 
VLSTSTQQES AIDAIRTDVV SNNIDTGTRY EKDPMQFAGS LQSGGSAGKT KDNTETPVTA 
AERERSVLAL EPPPTKVTVE ADDPSNAGNE SETTFSLMQR IEHTPRNLTN IPKMRVVLWP 
DTQSGVRNSE SFHLTENGIN ESAYLTLSNE TWDFHSNVVW VGDMGMGGPR RQWCGAFGAL 
AKQAKDKRRV SRLPLQWPIC IVDYADGPSL PRCANIEAQV GVENVRYSVR SVVTGRNWNE 
TIGWVQGGGR LSLNKTYGIT YRQASYMVRT DMIKVLENSL RARNMSLADP IERIDRPVDV 
AHFWPHSNSS TNQQDRRSVL HFRSKLRSKI SDLVVDLGKT QSSLNVFVGL KGHAKESGRT 
GVHTDYMNAL LASKIVVVTQ RDEWEEHYRL MEAIIGGAMV MTDRMLTLPA GLQNGTSIVE 
FDSAESLVSL ISYYLRHSDE RLEIARAARD VALRKHRSWH RMEEIIFGES LSNCSFQHPN 
SPCPYVAHGI DSKR