Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49879 |
Symbol | |
ID | 7198511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011693 |
Strand | - |
Start bp | 173070 |
End bp | 173985 |
Gene Length | 916 bp |
Protein Length | 253 aa |
Translation table | |
GC content | 56% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184748 |
Protein GI | 219129127 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00515793 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCCGA CACCAAATCG CACAACGCGT TGCGTACTCT TCCTCGTGGC GACACTGCTG TCGCGGTCCA CCGCGTGGCT ACCGACTCTC ACGCAGCCCC CGGGCTTCCG TCACGCCTTC CCGTTCCTCG CGAGCCGGAC GTCGGCAGAC CCCGCGTCGC TGGAGACGCA CGTGGCCTTG TTGACGCGCG CCGCCGATAC CAAAACGGAA GACTCGGAAC AGGTGTACAC GGCGTTGGCG GAGTTGGAAA CACTCATGCG ACGTCGGGCG CGGGAGGATT ATCCCGCAAC GGCCGAGGCT ACGCTCCGGG CGCTGGACGG CGACTGGCGT CTCGTCTTTA CCACCGGGAC GGCGCAGACG CAACAAAAGT ACGGGAAAAT CAATTACTTT CCCATCAAGG CCGTGCAGAG TTTTCGGACG ACGAAGGAAC CAATGGAAAT CGAAAACGGA ATCTATTTCG GAGACTTTCC CGCCGTGCGC TTTTCGGGAA CCATGGAGTT TGATTTGCAA AAACGCAAAC TCGAGTTCGA TTTTGATAAG GTCTTGCTAT TGAATTTCTT TGACGTGACG CTAAAAAAAG GAGAAGCCGC CAATTTGGGG GCCAAGTCCG GATTAGGCAG CGAGTCCAAC GTGGTCAACA CCAAACGGGA CAAGAAGGCA TTCTTCAACT GGATTTCGGC CGACGAAAAT ATCGCCACGG CACGGGGTGG CGGCGGAGGC CTCGCACTGT GGAAGCGTAT CCCTAGCGCG ACGCCCGAAT AAAGAACACA CCATCACACC GTCCTCATTT GACGGACAAA TCACTATGCC ATCCTGGATG CACCTCGTTT TTTTCTTCAA CTGTCGGCAC TCTCAATTGA CTATCCCCGA CTACGCTTAC AAGTATTAAA CCCCCCGAGT AAACAGACTA ATGTTC
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Protein sequence | MLPTPNRTTR CVLFLVATLL SRSTAWLPTL TQPPGFRHAF PFLASRTSAD PASLETHVAL LTRAADTKTE DSEQVYTALA ELETLMRRRA REDYPATAEA TLRALDGDWR LVFTTGTAQT QQKYGKINYF PIKAVQSFRT TKEPMEIENG IYFGDFPAVR FSGTMEFDLQ KRKLEFDFDK VLLLNFFDVT LKKGEAANLG AKSGLGSESN VVNTKRDKKA FFNWISADEN IATARGGGGG LALWKRIPSA TPE
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