Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49876 |
Symbol | |
ID | 7198509 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011693 |
Strand | - |
Start bp | 167379 |
End bp | 168336 |
Gene Length | 958 bp |
Protein Length | 227 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184746 |
Protein GI | 219129123 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00416542 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | AGCACGCACC CAGGAATCAC ATAGCCGACG CAAAATGAAA ACTTCAGTAG CATATTTATT TGCCGTGCTC AGCTTTCTCG GCCGGAGCGC CGCCTTTCAA GTGACTCCTA TCGGACTTCA GAATACGGGA GTTCGCTATC GAACGATCTT TTACAGTACG ACACCAGAGC AAACCAGCGA GATTTCGAAC GTGGAGAAGT TCTTGCAGTC GAAGTATCCA GAATTTTTGG CTTTGATAGG CAAAAATTCC CAGGTCATGA AGACGTTACG GGAATCGAAC ACGGAAGGAT ACACGCTGTT TGCTCCTAAC ACCGAAGCCT TTGCGAATCT TGGTGACAAG AAACGTGCAC AGCTCCAAGA TCCGAGAAAT CTCGAAACGG CCGAAAAGAT GGGGGCCTAC CACGTCGTCG CCAGCGAACC CCTGACGGCG ACCCGGCTAT TTCGCGAGAA CTGGACCGTT CCCAAACAGG ATGGCAAGCC GGTGTTGGCG ATTGGTGGTG TCAAGAGTCT GGGTGGTGAT GTCCCCGTTG GTCGCACCAA GGTAGGTGTT GGGATTCAAA GAACGTAACT TTCTATTCTG CGCCACCTCC GCCATTCCTT GAATCTAATG TGATCCTTCA ATTCCGTACA GTCGGGAGGG CTTTTGGGAT GGGGAGCCAA GGAAGATGGC GGTGTAACGG TCGGCCCCGA CGCAAAAATT GTCCAATCTT GGAACGTTGG AAACTGCATC GTGCACGAGG TGGACGCCCT AGTCTCACCC GTCATACTGT GGAGATACTG CGATCAGCTC CGGATTCCGG GGTTTTAATC GATTTGGCAT GAGGCGTTCA ACCCAACTGA AAAGGATCCC AAAAGCGTCA TAATCATAGG TAGCACCAAT CGGTTCTGCA GCTAAAAGCT AAATTTGCTA AGGATGCACG CAAACACACA GAGATAATAA CTATTTTAAG GGAGTTTT
|
Protein sequence | MKTSVAYLFA VLSFLGRSAA FQVTPIGLQN TGVRYRTIFY STTPEQTSEI SNVEKFLQSK YPEFLALIGK NSQVMKTLRE SNTEGYTLFA PNTEAFANLG DKKRAQLQDP RNLETAEKMG AYHVVASEPL TATRLFRENW TVPKQDGKPV LAIGGVKSLG GDVPVGRTKS GGLLGWGAKE DGGVTVGPDA KIVQSWNVGN CIVHEVDALV SPVILWRYCD QLRIPGF
|
| |