| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49830 |
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| Symbol | |
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| ID | 7198659 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011693 |
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| Strand | - |
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| Start bp | 15762 |
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| End bp | 19814 |
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| Gene Length | 4053 bp |
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| Protein Length | 959 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184716 |
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| Protein GI | 219129060 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.253319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGTGC GACAGGTAAA AGATACCAAC AGGAACGTGG GTGGTGATCA TGTTGAGGAT
GGCGATGGAA CCGTTGAATT TGTGTCGGCC TTATTGTACG ACACGATGTA TTCGCGGGAC
GATTATGGGA ATCCTTTGGA AGAGGATACA GGAAAGGATT ATACAAATGA ATGATAGGAT
CCAGTCCCAC AAATTATGAG GGAGTAATCA AGGAGGGATG AATACTCGCT ACAAGATTCT
GTGTGGGATT TATATTTAGA AGAAGAAGAC TCGTACATGT GAGTAAGATT ATCTGGAACA
TGGTAACGGC AGTGCAGTGA ACTGGACCTC CCTAGCCTGA TGGACTAGTA GTAGAATAAT
CTTCCTCTCA TTGTTTTAGA AAGTCATTGA TCCAAATATT GCATTAGCAT AGGTCCTCGT
ATCCGCTGTC TAACCCGTGG GGAGCGTCGT AAGCGAGTTG AGTTTTACAG TCCCTAGGCT
TGCTTAGGTG TATCGCAGGT CGTTCGTAAT AACGCCCAAC CTTCGTTTAC CAGACTTTGT
CGAAACTGCG TTTTTCCTGT CTTTCGTACG TACATTGGTT GTACTACGTA ACAGATTAAC
AGTCTTGACA GCACGTCAAA CCACTGCTGC TCATTCGCAC AGTCGTTACT GGTAAACACC
CTTAAGTCTA CTTAAGGTCG TTCTCAATTT TCCACGAGCT CCGTGAATTT TGAGAACTAA
TCGCTTACAT CCATTCGTGT TGTATAAGTG TCAGAGGTAT CACTTAAGGT GATATTTATC
GGCTTGTGCG ACACATTGTT TGAAAGCCGC TTCCCTACTT CCTCACGCTA ACTGGTACCG
AGGACCCACT AGTACTGCTA CAGGGTTTTT CGGTAAGTTA CTCGTGGCTT CCCTACTTCC
TCGGAGTCGC CGGTGCCGAA ACCCCCTTGG AGTCTTCAGG GCTTGTCGGC AGGGCCGCTT
CGTGACTACG GGTTGCTCTA GTCAGGTGAG GTAGAAATAC CAATAGGCCT GAAGACCTCA
GCCCTGATTC CGGTTGAGAC GGACTTACTG CCCGGCTTAA AGCAGTGCCG GGGGGGGGGG
GGGGGGCTAA TCAAACCCTC GTCAGTCCCC GAGGACACTA CCTACGGAGG TAGAAGTGAG
TGTACCAGTG CTAGCTTTGT TCACTGGTGT AGGGTCATAC TAACGAAGTC CGCTATAGTA
TACAGCGAAG GACCCGAACC CATAAGTAGT ATTTTTCTTG AAGAACAATC TATTGGTCCG
GCTACCCAGC CCACAATGGT ACCTGCCACC CGGCAAATGA CAAGCGAGGC TGTCTATGCA
CACATCTTGG ATAACATTCT CTTGTTGTCC CAAGAACACC CTATCCGTCT TAGCTTCCAA
CAGCAGGGAT ACGAAACAGC CATCGACATT CTCTCTATCT TTGAGAACGA ACTCGATGCC
CTCGGTTACA AGTCTCCCAC GCCTATTGAC GGTGTAGACA ACCCACGGAT CCCACTGCTC
ATGGCGCATC GACAAATCCT GCGTCATTTT CTACGTTGGC AAGCATCCCT TGAACGGCAA
AAGGGGAGCC CCATGAAGCC TTCGGAACTC ATTGCGTTGA ACAACGAAGA CTTTGTTCAG
TATCGAGGAT CAGCACTTGG CCAGGTATCG ACAACCAATA GTCCCTCGAC TTTGGCCCCC
ACCTCAACGA GCATCACCCC TAAAGTGCGA TCTGCTGCTG ACGACTTCAG GCGTGGCGTT
AAATGTGACA AAACGCATTA TCCCGTACTC AAGGATGACA AGTACTGGGA TAACTTCTAC
CGTTTGTTTG TGGTCACTGC AGTCTCGCAT AATGTTGAAA AGGTCCTTGA CCCAATGTAT
GCTCTTACAG AGCCCTCTGA CAAAGCACTT TTCGAAGAGC AAAAGAAGTT TGTGTACTCT
GCACTAGAAC ACACACTGCA GACAGATATG GGTAAGAACC TCGTTTGAGA ACCCAGCTTT
GACTTCGATG CGCAAGAAGT GTTTTGTAAA GTTGTCAAAC ACTATACGGA ATCAGCAAGT
GCGAAGATCA GTTCAGCCAC CACGCTTGGT TACCTAACTA CGGCGAAATA TGGATCCTCA
TGGACAGGCA CAGCAGAAGG ATTTATCCTT CATTGGAAGA ACCACCTTTG TATCTACCAC
AATACTGTAC CAATGGCTGA GCAACTCCCA AAGCAACTGT GTCTTAGTCT TTTGGAGAAT
GCTGTCCACA ATGTACCGGA ACTTTGTCAA GTGAAGATCA CAGCCACTCT TGACCTAGCC
AAAGGAGGTA ATCCTATTAG CTACGAGAGT TACCTTAGTC TTCTACTTGC TTCAGCGTCA
CTCTACAATA AAGGAAACAA CTTCTCTAAT TCCCGTAGTC CCAAGGAAAA GCGTAGTATT
CATTCTACTG ATCTTTCTTA CCATCCTACA GACTTTGACA CTGATCCGGA TGTTAACTAC
AATATTGACT TGTCACCTTC CGTACTCTAT GAAGCCAATG CGCATGCCCG CAGGGAGAAT
TGTACTAATA ACCGACATCA TAGTACGCCC ACTAACCGTG AACGACCTTA TATCCCTAGA
GATATGTGGA ACCAGCTCTC AGATGATGCT AAGGCTATAC TTCAGGGATT GGCTGCCCCA
GCTAAGGTTC TCCCGGTTAG TAATGGATTG GCACGTCCCT TGATGGCGCA TGTACATGCA
ACTGGCAGTC GCGACGCAGC CCCGGACGAC AACAATGGAA CTCCCGTGGA TACCTTTCAT
GATTGTGCAC CAGAAACGGA ACTCCTAGCA CATCTTTCTG ATCGGGTTGG ACGTATGGAT
CCAGGCGACA TACGTAAGGT ACTTGCAGCG TCACGCAACA CCGTATCAAC GGGTTCCCTC
CGTCCTCATG GTACCACCAA GTCACTTCAG TCAAATGTGT TACAGTACCA AGTCTCCCGA
CACACAGTAC AAAATACCAC ATCTGCACTT GTCGATCGCG GTGCCAACGG TGGACTTGCG
GGGAGTGATG TTACCGTACT GCACAAAACT GGACGTTCAG CCAACATAAC CGGTATAAAT
GAACATACCT TGTCCAATCT AGACATTGTC ACGGCTGCCG GTCTTGTCGA ATCGCAACGA
GGGCCCATTG TTGTTATCAT GCATCAATAC GCGCATCTTG GTAAAGGTAA AACCATCCAT
TCCAGCGCCC AACTTGAACA TTGCCACAAT TGTGTTCAAG ATCGGTCTCG TACCGTGGGC
GGCAACCAAC GTATTGTTAC CCTGGATGAT TACATCATCC CACTAAACAT ACGACAGGGT
CTTCCGTACA TGGATATGCG CGCACCCACC AGTCATGAAC TTCATTCCCT TCCCCATGTT
GTTCTTACTT CTGACGTTGA CTGGGACCCA TCAGTTCTCG ACAACGAAAT CGACATGAAG
GCTGAATGGC ATACCGACAT CCATGACTTA CCTGGCATGC CATATATTGA GCCACGATTT
GACAATCTCG GCCAATACAT GCACCGACAC GTTGCCATCT GTAATTCTCA ACGTCACGAT
GCTCTCGACC GTATACTTAC GTGTAACAAG CATGCTGTCC AACGCAATGA ACATGATTAT
GATGCCCTCC GTCCTTGCCT GGCATGGGTC TCCAGTGATA CCGTTCGCAA AACCATTTTT
GCAACCACTC AATATGCGCG TGAGGTCTAT AATGCACCTC TACGTAAACA TTTCAAGTCT
CGTTTCCCGG CTTTAAAGGT CCATTGACGC AATGAGGCCG TTGCCACAGA TACAATCTGG
TCCGACACCC CTGCCGTCGA CAACGGAGCA AAGTATGCGC AACTTTTTGT AGGGAGACGT
TCCCTGGTCA CTGACGTCTA CCCCATGAAA ACCGACAAAG AATTTGTCAA CGCCCTAGAG
GATCATATCC GTTACCGTGG GGCCATGGAT AAGCTCATCA GCGACCGTGC TCAAGCTGAG
ATCAGTAAAA AGGTTACTGA CATTACACGG GCTTACCACA TTGACCAGTG GCAAAGCGAA
CCACATCATC AGCACCAGAA CTTCGCTGAA TGA
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| Protein sequence | MSVRQVKDTN RNVGGDHVED GDGTVEFVSA LLSFVITPNL RLPDFVETAF FLSFPLPYFL
TLTGTEDPLV LLQGFSSGEV EIPIGLKTSA LIPVETDLLP GLKQCRGGGG GLIKPSSVPE
DTTYGGRIYS EGPEPISSIF LEEQSIGPAT QPTMVPATRQ MTSEAVYAHI LDNILLLSQE
HPIRLSFQQQ GYETAIDILS IFENELDALG YKSPTPIDGV DNPRIPLLMA HRQILRHFLR
WQASLERQKG SPMKPSELIA LNNEDFVQYR GSALGQVSTT NSPSTLAPTS TSITPKVRSA
ADDFRRGVKC DKTHYPVLKD DKYWDNFYRL FVVTAVSHNV EKVLDPMYAL TEPSDKALFE
EQKKFVYSAL EHTLQTDMAS AKISSATTLG YLTTAKYGSS WTGTAEGFIL HWKNHLCIYH
NTVPMAEQLP KQLCLSLLEN AVHNVPELCQ VKITATLDLA KGDFDTDPDV NYNIDLSPSV
LYEANAHARR ENCTNNRHHS TPTNRERPYI PRDMWNQLSD DAKAILQGLA APAKVLPVSN
GLARPLMAHV HATGSRDAAP DDNNGTPVDT FHDCAPETEL LAHLSDRVGR MDPGDIRKVL
AASRNTVSTG SLRPHGTTKS LQSNVLQYQV SRHTVQNTTS ALVDRGANGG LAGSDVTVLH
KTGRSANITG INEHTLSNLD IVTAAGLVES QRGPIVVIMH QYAHLGKGKT IHSSAQLEHC
HNCVQDRSRT VGGNQRIVTL DDYIIPLNIR QGLPYMDMRA PTSHELHSLP HVVLTSDVDW
DPSVLDNEID MKAEWHTDIH DLPGMPYIEP RFDNLGQYMH RHVAICNSQR HDALDRILTC
NKHAVQRNEH DYDALRPCLA WVSSDTVRKT IFATTQYARE VYNAPLRRRS LVTDVYPMKT
DKEFVNALED HIRYRGAMDK LISDRAQAEI SKKVTDITRA YHIDQWQSEP HHQHQNFAE
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