Gene PHATRDRAFT_49830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49830 
Symbol 
ID7198659 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011693 
Strand
Start bp15762 
End bp19814 
Gene Length4053 bp 
Protein Length959 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184716 
Protein GI219129060 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.253319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTGC GACAGGTAAA AGATACCAAC AGGAACGTGG GTGGTGATCA TGTTGAGGAT 
GGCGATGGAA CCGTTGAATT TGTGTCGGCC TTATTGTACG ACACGATGTA TTCGCGGGAC
GATTATGGGA ATCCTTTGGA AGAGGATACA GGAAAGGATT ATACAAATGA ATGATAGGAT
CCAGTCCCAC AAATTATGAG GGAGTAATCA AGGAGGGATG AATACTCGCT ACAAGATTCT
GTGTGGGATT TATATTTAGA AGAAGAAGAC TCGTACATGT GAGTAAGATT ATCTGGAACA
TGGTAACGGC AGTGCAGTGA ACTGGACCTC CCTAGCCTGA TGGACTAGTA GTAGAATAAT
CTTCCTCTCA TTGTTTTAGA AAGTCATTGA TCCAAATATT GCATTAGCAT AGGTCCTCGT
ATCCGCTGTC TAACCCGTGG GGAGCGTCGT AAGCGAGTTG AGTTTTACAG TCCCTAGGCT
TGCTTAGGTG TATCGCAGGT CGTTCGTAAT AACGCCCAAC CTTCGTTTAC CAGACTTTGT
CGAAACTGCG TTTTTCCTGT CTTTCGTACG TACATTGGTT GTACTACGTA ACAGATTAAC
AGTCTTGACA GCACGTCAAA CCACTGCTGC TCATTCGCAC AGTCGTTACT GGTAAACACC
CTTAAGTCTA CTTAAGGTCG TTCTCAATTT TCCACGAGCT CCGTGAATTT TGAGAACTAA
TCGCTTACAT CCATTCGTGT TGTATAAGTG TCAGAGGTAT CACTTAAGGT GATATTTATC
GGCTTGTGCG ACACATTGTT TGAAAGCCGC TTCCCTACTT CCTCACGCTA ACTGGTACCG
AGGACCCACT AGTACTGCTA CAGGGTTTTT CGGTAAGTTA CTCGTGGCTT CCCTACTTCC
TCGGAGTCGC CGGTGCCGAA ACCCCCTTGG AGTCTTCAGG GCTTGTCGGC AGGGCCGCTT
CGTGACTACG GGTTGCTCTA GTCAGGTGAG GTAGAAATAC CAATAGGCCT GAAGACCTCA
GCCCTGATTC CGGTTGAGAC GGACTTACTG CCCGGCTTAA AGCAGTGCCG GGGGGGGGGG
GGGGGGCTAA TCAAACCCTC GTCAGTCCCC GAGGACACTA CCTACGGAGG TAGAAGTGAG
TGTACCAGTG CTAGCTTTGT TCACTGGTGT AGGGTCATAC TAACGAAGTC CGCTATAGTA
TACAGCGAAG GACCCGAACC CATAAGTAGT ATTTTTCTTG AAGAACAATC TATTGGTCCG
GCTACCCAGC CCACAATGGT ACCTGCCACC CGGCAAATGA CAAGCGAGGC TGTCTATGCA
CACATCTTGG ATAACATTCT CTTGTTGTCC CAAGAACACC CTATCCGTCT TAGCTTCCAA
CAGCAGGGAT ACGAAACAGC CATCGACATT CTCTCTATCT TTGAGAACGA ACTCGATGCC
CTCGGTTACA AGTCTCCCAC GCCTATTGAC GGTGTAGACA ACCCACGGAT CCCACTGCTC
ATGGCGCATC GACAAATCCT GCGTCATTTT CTACGTTGGC AAGCATCCCT TGAACGGCAA
AAGGGGAGCC CCATGAAGCC TTCGGAACTC ATTGCGTTGA ACAACGAAGA CTTTGTTCAG
TATCGAGGAT CAGCACTTGG CCAGGTATCG ACAACCAATA GTCCCTCGAC TTTGGCCCCC
ACCTCAACGA GCATCACCCC TAAAGTGCGA TCTGCTGCTG ACGACTTCAG GCGTGGCGTT
AAATGTGACA AAACGCATTA TCCCGTACTC AAGGATGACA AGTACTGGGA TAACTTCTAC
CGTTTGTTTG TGGTCACTGC AGTCTCGCAT AATGTTGAAA AGGTCCTTGA CCCAATGTAT
GCTCTTACAG AGCCCTCTGA CAAAGCACTT TTCGAAGAGC AAAAGAAGTT TGTGTACTCT
GCACTAGAAC ACACACTGCA GACAGATATG GGTAAGAACC TCGTTTGAGA ACCCAGCTTT
GACTTCGATG CGCAAGAAGT GTTTTGTAAA GTTGTCAAAC ACTATACGGA ATCAGCAAGT
GCGAAGATCA GTTCAGCCAC CACGCTTGGT TACCTAACTA CGGCGAAATA TGGATCCTCA
TGGACAGGCA CAGCAGAAGG ATTTATCCTT CATTGGAAGA ACCACCTTTG TATCTACCAC
AATACTGTAC CAATGGCTGA GCAACTCCCA AAGCAACTGT GTCTTAGTCT TTTGGAGAAT
GCTGTCCACA ATGTACCGGA ACTTTGTCAA GTGAAGATCA CAGCCACTCT TGACCTAGCC
AAAGGAGGTA ATCCTATTAG CTACGAGAGT TACCTTAGTC TTCTACTTGC TTCAGCGTCA
CTCTACAATA AAGGAAACAA CTTCTCTAAT TCCCGTAGTC CCAAGGAAAA GCGTAGTATT
CATTCTACTG ATCTTTCTTA CCATCCTACA GACTTTGACA CTGATCCGGA TGTTAACTAC
AATATTGACT TGTCACCTTC CGTACTCTAT GAAGCCAATG CGCATGCCCG CAGGGAGAAT
TGTACTAATA ACCGACATCA TAGTACGCCC ACTAACCGTG AACGACCTTA TATCCCTAGA
GATATGTGGA ACCAGCTCTC AGATGATGCT AAGGCTATAC TTCAGGGATT GGCTGCCCCA
GCTAAGGTTC TCCCGGTTAG TAATGGATTG GCACGTCCCT TGATGGCGCA TGTACATGCA
ACTGGCAGTC GCGACGCAGC CCCGGACGAC AACAATGGAA CTCCCGTGGA TACCTTTCAT
GATTGTGCAC CAGAAACGGA ACTCCTAGCA CATCTTTCTG ATCGGGTTGG ACGTATGGAT
CCAGGCGACA TACGTAAGGT ACTTGCAGCG TCACGCAACA CCGTATCAAC GGGTTCCCTC
CGTCCTCATG GTACCACCAA GTCACTTCAG TCAAATGTGT TACAGTACCA AGTCTCCCGA
CACACAGTAC AAAATACCAC ATCTGCACTT GTCGATCGCG GTGCCAACGG TGGACTTGCG
GGGAGTGATG TTACCGTACT GCACAAAACT GGACGTTCAG CCAACATAAC CGGTATAAAT
GAACATACCT TGTCCAATCT AGACATTGTC ACGGCTGCCG GTCTTGTCGA ATCGCAACGA
GGGCCCATTG TTGTTATCAT GCATCAATAC GCGCATCTTG GTAAAGGTAA AACCATCCAT
TCCAGCGCCC AACTTGAACA TTGCCACAAT TGTGTTCAAG ATCGGTCTCG TACCGTGGGC
GGCAACCAAC GTATTGTTAC CCTGGATGAT TACATCATCC CACTAAACAT ACGACAGGGT
CTTCCGTACA TGGATATGCG CGCACCCACC AGTCATGAAC TTCATTCCCT TCCCCATGTT
GTTCTTACTT CTGACGTTGA CTGGGACCCA TCAGTTCTCG ACAACGAAAT CGACATGAAG
GCTGAATGGC ATACCGACAT CCATGACTTA CCTGGCATGC CATATATTGA GCCACGATTT
GACAATCTCG GCCAATACAT GCACCGACAC GTTGCCATCT GTAATTCTCA ACGTCACGAT
GCTCTCGACC GTATACTTAC GTGTAACAAG CATGCTGTCC AACGCAATGA ACATGATTAT
GATGCCCTCC GTCCTTGCCT GGCATGGGTC TCCAGTGATA CCGTTCGCAA AACCATTTTT
GCAACCACTC AATATGCGCG TGAGGTCTAT AATGCACCTC TACGTAAACA TTTCAAGTCT
CGTTTCCCGG CTTTAAAGGT CCATTGACGC AATGAGGCCG TTGCCACAGA TACAATCTGG
TCCGACACCC CTGCCGTCGA CAACGGAGCA AAGTATGCGC AACTTTTTGT AGGGAGACGT
TCCCTGGTCA CTGACGTCTA CCCCATGAAA ACCGACAAAG AATTTGTCAA CGCCCTAGAG
GATCATATCC GTTACCGTGG GGCCATGGAT AAGCTCATCA GCGACCGTGC TCAAGCTGAG
ATCAGTAAAA AGGTTACTGA CATTACACGG GCTTACCACA TTGACCAGTG GCAAAGCGAA
CCACATCATC AGCACCAGAA CTTCGCTGAA TGA
 
Protein sequence
MSVRQVKDTN RNVGGDHVED GDGTVEFVSA LLSFVITPNL RLPDFVETAF FLSFPLPYFL 
TLTGTEDPLV LLQGFSSGEV EIPIGLKTSA LIPVETDLLP GLKQCRGGGG GLIKPSSVPE
DTTYGGRIYS EGPEPISSIF LEEQSIGPAT QPTMVPATRQ MTSEAVYAHI LDNILLLSQE
HPIRLSFQQQ GYETAIDILS IFENELDALG YKSPTPIDGV DNPRIPLLMA HRQILRHFLR
WQASLERQKG SPMKPSELIA LNNEDFVQYR GSALGQVSTT NSPSTLAPTS TSITPKVRSA
ADDFRRGVKC DKTHYPVLKD DKYWDNFYRL FVVTAVSHNV EKVLDPMYAL TEPSDKALFE
EQKKFVYSAL EHTLQTDMAS AKISSATTLG YLTTAKYGSS WTGTAEGFIL HWKNHLCIYH
NTVPMAEQLP KQLCLSLLEN AVHNVPELCQ VKITATLDLA KGDFDTDPDV NYNIDLSPSV
LYEANAHARR ENCTNNRHHS TPTNRERPYI PRDMWNQLSD DAKAILQGLA APAKVLPVSN
GLARPLMAHV HATGSRDAAP DDNNGTPVDT FHDCAPETEL LAHLSDRVGR MDPGDIRKVL
AASRNTVSTG SLRPHGTTKS LQSNVLQYQV SRHTVQNTTS ALVDRGANGG LAGSDVTVLH
KTGRSANITG INEHTLSNLD IVTAAGLVES QRGPIVVIMH QYAHLGKGKT IHSSAQLEHC
HNCVQDRSRT VGGNQRIVTL DDYIIPLNIR QGLPYMDMRA PTSHELHSLP HVVLTSDVDW
DPSVLDNEID MKAEWHTDIH DLPGMPYIEP RFDNLGQYMH RHVAICNSQR HDALDRILTC
NKHAVQRNEH DYDALRPCLA WVSSDTVRKT IFATTQYARE VYNAPLRRRS LVTDVYPMKT
DKEFVNALED HIRYRGAMDK LISDRAQAEI SKKVTDITRA YHIDQWQSEP HHQHQNFAE