Gene PHATRDRAFT_40779 details

Gene Information

• Locus tag: PHATRDRAFT_40779
• ID: 7198544
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011693
• Strand: +
• Start bp: 373434
• End bp: 375597
• Gene Length: 2164 bp
• Protein Length: 685 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002184698
• Protein GI: 219129023

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGGGGA CACACGCTAG TACCGCGACG GTACGACTAC TCCGGTGTGC GACGGTACCA 
CCAGTCGGTC GATCGTCACC TTCTTTGAAA CGGCGGTACC AATCGTACGC TCCCCGAGTG 
GTGGCGGCGA CTACGGCAAC GGCAGATATT CTGCGGAATG CCAACGGATC CTTCGATAGT 
CCTAATTACC GGACACTGCT GATCCGCCGG TGGGCTTCCT CCACGACTAC TACAACCAGT 
ACTACTGCGA CTACTACAAC GGCCACGTCC ACAACGAGTG GGGCTCCGGA TACTACTTTG 
TCAACTTCTG CACTCGGTCG GATAGAATCC CTAACGTCGA CGACTTCTCC ATTGGCCCTG 
ATCGAACCCA TGTCCATGCC ACGTATTTAC CGCTATTTGA ATTTAGCAAC GTACCAACGA 
GATGAGCTGG AAAGCGTGTT TGACAGAATA CGAAACGGAT ACGCTCTCCA AACTACACAC 
GACCAAAAGA CTGCCGTCGG GACTGGGCCC GAAGCCACGG ACTCCGACTC GGTCGATCCA 
GAGGAAACCA TTACGGACTC TCAGATCCAG CGGTATCTAC TGTCGCGCAT TTACGAGCTC 
GAAGAAGAAA GTGACGAAGT CATTGAAGAA GGTCCAGTTA CTCAGACCTT GCGCGAACAG 
TACGTACAGC ACGAAAGTCA ACGCTTTCTC CGAGCCTTTG CGGATTACGC GACGAGGGCA 
CCCGGGAATG GTACGCTTCT GACCACAACG ACCATCAACA AACCCGAATT TTGTGACCTT 
TTGACAACCA AAGCCAGTCA AGTTGATCTA CAGCGAACCT GGCCCATTAC GGTGAGTATG 
CTCTTGGTAG GCTCGTCTGT GGGAGTCATC ACGCCCGCCA TGCCTTTTGT TGTTGAGCAA 
TTGAGTTTGA CGGCGAGTCA GTACGGTATG GTGGTCTCGG CCTTTGGATT GGCCAAAATG 
CTGGGCAACA TCCCGTCCGC GATTGCCGTG GAACGACACG GACGGAAACC CTTCATGACC 
TGGAGTCTAC TCATCATTGC CTGCGGCGTG GGCGGCATTG GTTTAGCCAA CAGTTTTGAA 
GAACTCTATA TTTGTCGATT ACTGACGGGT ACGTGACAAA AGGGTCGCGG CAACCTCCTT 
TATTTGTTTC TAGTTTACAC ACAACACTCA TCGCTAGTAC GTTTCACATC TTGCCTCTGA 
CTGTGCGACT GCAGGTCTTG GTGTGAGTTT CTTGTCCACG GCCGGCACGC TCATGATTTC 
AGACTTGTCC ACGCCGTTGA ATCGCGCGTC CACGTACGCG CCGATTATGA GCGCCTTTTC 
GGCAGGCACC GCACTCGGAC CAGCCCTCGG TGGGATACTA GTCGACCAGG TGGGCCTGCA 
TCCAACATTT TACATGGTCG GGGTTTCGTA TTTGGGAGTC GCAGCCTTGA ATCGAGCCAT 
TTTGAACGAA ACCAAAACAC ATGCCGTCCA TTTTCCGTGG CAACAACGGC GGTCCGGCGA 
TGATGTCGCG GGCGACAGTT TGTCGAGCTC AGTCCAGGAC GCAGTGGGTC AATGGGTACC 
GTTGTTGCAG AATTCGTCCG TCCGCAACAT TATGATTATG AACGGGATGT ACTGGATTGC 
ATTGGCGGGC TCACAGATGA CATTGTTGCC GTTAATGCTG ACCAATTCTG GAGGCTTGGC 
CATGTCCGCG ACTCAAGTTG GTCAGGTCTA CATGTCCATG AGTCTCGTCC AAATCGTCGG 
CAACCCGCTA TTTGCCAAGG TTATGGATAA GACGGGCAAG GCGCCGGCGA TTGTGACGGG 
TTGCACATTG ATCAGTACAG CTATGGTTGG ACTCGCCTAC TGCGACGATT ATACACAATT 
AGCAGCAGCG CTGGGATTAT GGAGTATTGG ATCGAGCATG CTCAGTACAG CCCCTCTTGC 
TCACCTTTCG GATAAGGTAG ATGATGCCAA GCGGGCCCAG GCAATTGCAC TACTAAGAAC 
CTGCGGGGAC GTTGGATTTT TGATAGGGGC CACTGGAATC GGGGCGTTGG CCGACTGGAC 
TGGGAGCCTG GAAACAGCTA TGCAAAGCAG TGCCGGTTTG TTGTTCACAG CAACGGCGTG 
GTATGCAACC AGACAGGTAC TGGATTCACG GATAGGAGCG CCTGCGAGAA AGTCGACCTC 
ATAG 

 

Protein sequence

MPGTHASTAT VRLLRCATVP PVGRSSPSLK RRYQSYAPRV VAATTATADI LRNANGSFDS 
PNYRTLLIRR WASSTTTTTS TTATTTTATS TTSGAPDTTL STSALGRIES LTSTTSPLAL 
IEPMSMPRIY RYLNLATYQR DELESVFDRI RNGYALQTTH DQKTAVGTGP EATDSDSVDP 
EETITDSQIQ RYLLSRIYEL EEESDEVIEE GPVTQTLREQ YVQHESQRFL RAFADYATRA 
PGNGTLLTTT TINKPEFCDL LTTKASQVDL QRTWPITVSM LLVGSSVGVI TPAMPFVVEQ 
LSLTASQYGM VVSAFGLAKM LGNIPSAIAV ERHGRKPFMT WSLLIIACGV GGIGLANSFE 
ELYICRLLTG LGVSFLSTAG TLMISDLSTP LNRASTYAPI MSAFSAGTAL GPALGGILVD 
QVGLHPTFYM VGVSYLGVAA LNRAILNETK THAVHFPWQQ RRSGDDVAGD SLSSSVQDAV 
GQWVPLLQNS SVRNIMIMNG MYWIALAGSQ MTLLPLMLTN SGGLAMSATQ VGQVYMSMSL 
VQIVGNPLFA KVMDKTGKAP AIVTGCTLIS TAMVGLAYCD DYTQLAAALG LWSIGSSMLS 
TAPLAHLSDK VDDAKRAQAI ALLRTCGDVG FLIGATGIGA LADWTGSLET AMQSSAGLLF 
TATAWYATRQ VLDSRIGAPA RKSTS