Gene PHATRDRAFT_40753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_40753 
SymboldsCYC8 
ID7198534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011693 
Strand
Start bp309722 
End bp310879 
Gene Length1158 bp 
Protein Length385 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184688 
Protein GI219129002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.987836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCCT CTTATTTCTC GCCAGTATCG TTGGACGACT CTGTAACCGC AGTAAAAGAG 
CCTTCCAGAA AAGCTTACGC TCAAGGCCGA GATCCCGACC TCCTCCGGGA ACAACTGTCT
GCTCTGCTTC AGAACGAATC ATCCTGGGCA GTTGCAAGTA TTCCTTGCCA GAAAGCCTTT
ATGGTTGGAA TAGAAGCGAA AGCGAAACCT CTAGGTGACT GGCGGCGAAA GATCTGCCAA
TGGAGTTACC GGGTGATTGA TCACTTTCGG ATGGATCGGG AAGTAGTTTC AGTCGGTATG
AATCTATTTG ATCGCTATCT AGCTGCCGGC TCACCTGCTT CATCGAGTCA GAATAAAACA
CGCTTTTACT GCCTTTGCCC GACTTGCAAG CGATATATTG ATGGTCGCAC CTACCAGCTG
GCTGCTATGA CTTGCCTCTA CCTGGGGATC AAGCTTCAAT CCGAAACCGT TACAGACAAC
ACTTACTCAA AACGACGACG TTTCCGACTC ACCTCATTTG TGGACCTGTC CCGTGGACTG
TTCTGCACCC GAGATATAGC TGATATGGAA CACGAAGTTC TGAAGACTTT AAGCTGGAAG
GTGTGCACTC CAACGCCGAT GACATTTGTC TCCTATATCC TAACGCTGAC ACCCGTAACT
TCCGACGTTC TCGAATCACA CGACAGCTCA GCCCTTGTAC TCCATGTAGT TCAAGAACTC
TCTCGATACT TGACAGAGCT CGCCGTATGT CTGGGAAGCG AGCTACCTCA ATATCCTCCG
TCGCAAGTGG CGTTAGCTTC AATTTTGGTT TCAATGGACC TGTTGACGTT GGAGGCCATA
TCTATCCATG TTCGCGATTG TTTTGCAACC GCCGCCTTTG CTTTGTGCGA ATGCGACGGC
GTCTGGGAGA GTATCCAGTA TCTACGTCTT AAACTCCAGC AGTCTCTGTG GCCAGAAATG
CTGTTTGATG CCTGTACAGA CTTGGGTCAT CCCATCTCGA TTGCACGAAA CAACGGCTTA
TTGGATATCG ATCAGGTATA TCGTGTCCAA AAACATGCAG CGGCCGCCCC CAACATCCTT
GCAGTAAGTC CTTTGCAGTC CCGGACCTTG AAAGATCTTT CTGCGTACGA GGGATCCCCC
GTCAGCGTTG CTCTCTGA
 
Protein sequence
MAASYFSPVS LDDSVTAVKE PSRKAYAQGR DPDLLREQLS ALLQNESSWA VASIPCQKAF 
MVGIEAKAKP LGDWRRKICQ WSYRVIDHFR MDREVVSVGM NLFDRYLAAG SPASSSQNKT
RFYCLCPTCK RYIDGRTYQL AAMTCLYLGI KLQSETVTDN TYSKRRRFRL TSFVDLSRGL
FCTRDIADME HEVLKTLSWK VCTPTPMTFV SYILTLTPVT SDVLESHDSS ALVLHVVQEL
SRYLTELAVC LGSELPQYPP SQVALASILV SMDLLTLEAI SIHVRDCFAT AAFALCECDG
VWESIQYLRL KLQQSLWPEM LFDACTDLGH PISIARNNGL LDIDQVYRVQ KHAAAAPNIL
AVSPLQSRTL KDLSAYEGSP VSVAL