Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_40753 |
Symbol | dsCYC8 |
ID | 7198534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011693 |
Strand | + |
Start bp | 309722 |
End bp | 310879 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184688 |
Protein GI | 219129002 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.987836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGGCCT CTTATTTCTC GCCAGTATCG TTGGACGACT CTGTAACCGC AGTAAAAGAG CCTTCCAGAA AAGCTTACGC TCAAGGCCGA GATCCCGACC TCCTCCGGGA ACAACTGTCT GCTCTGCTTC AGAACGAATC ATCCTGGGCA GTTGCAAGTA TTCCTTGCCA GAAAGCCTTT ATGGTTGGAA TAGAAGCGAA AGCGAAACCT CTAGGTGACT GGCGGCGAAA GATCTGCCAA TGGAGTTACC GGGTGATTGA TCACTTTCGG ATGGATCGGG AAGTAGTTTC AGTCGGTATG AATCTATTTG ATCGCTATCT AGCTGCCGGC TCACCTGCTT CATCGAGTCA GAATAAAACA CGCTTTTACT GCCTTTGCCC GACTTGCAAG CGATATATTG ATGGTCGCAC CTACCAGCTG GCTGCTATGA CTTGCCTCTA CCTGGGGATC AAGCTTCAAT CCGAAACCGT TACAGACAAC ACTTACTCAA AACGACGACG TTTCCGACTC ACCTCATTTG TGGACCTGTC CCGTGGACTG TTCTGCACCC GAGATATAGC TGATATGGAA CACGAAGTTC TGAAGACTTT AAGCTGGAAG GTGTGCACTC CAACGCCGAT GACATTTGTC TCCTATATCC TAACGCTGAC ACCCGTAACT TCCGACGTTC TCGAATCACA CGACAGCTCA GCCCTTGTAC TCCATGTAGT TCAAGAACTC TCTCGATACT TGACAGAGCT CGCCGTATGT CTGGGAAGCG AGCTACCTCA ATATCCTCCG TCGCAAGTGG CGTTAGCTTC AATTTTGGTT TCAATGGACC TGTTGACGTT GGAGGCCATA TCTATCCATG TTCGCGATTG TTTTGCAACC GCCGCCTTTG CTTTGTGCGA ATGCGACGGC GTCTGGGAGA GTATCCAGTA TCTACGTCTT AAACTCCAGC AGTCTCTGTG GCCAGAAATG CTGTTTGATG CCTGTACAGA CTTGGGTCAT CCCATCTCGA TTGCACGAAA CAACGGCTTA TTGGATATCG ATCAGGTATA TCGTGTCCAA AAACATGCAG CGGCCGCCCC CAACATCCTT GCAGTAAGTC CTTTGCAGTC CCGGACCTTG AAAGATCTTT CTGCGTACGA GGGATCCCCC GTCAGCGTTG CTCTCTGA
|
Protein sequence | MAASYFSPVS LDDSVTAVKE PSRKAYAQGR DPDLLREQLS ALLQNESSWA VASIPCQKAF MVGIEAKAKP LGDWRRKICQ WSYRVIDHFR MDREVVSVGM NLFDRYLAAG SPASSSQNKT RFYCLCPTCK RYIDGRTYQL AAMTCLYLGI KLQSETVTDN TYSKRRRFRL TSFVDLSRGL FCTRDIADME HEVLKTLSWK VCTPTPMTFV SYILTLTPVT SDVLESHDSS ALVLHVVQEL SRYLTELAVC LGSELPQYPP SQVALASILV SMDLLTLEAI SIHVRDCFAT AAFALCECDG VWESIQYLRL KLQQSLWPEM LFDACTDLGH PISIARNNGL LDIDQVYRVQ KHAAAAPNIL AVSPLQSRTL KDLSAYEGSP VSVAL
|
| |