Gene PHATRDRAFT_40677 details

Gene Information

• Locus tag: PHATRDRAFT_40677
• ID: 7198586
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011693
• Strand: +
• Start bp: 122372
• End bp: 129240
• Gene Length: 6869 bp
• Protein Length: 2243 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002184650
• Protein GI: 219128923

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTCGTT CCGACGATGA AAGTGATTTC GATCAGAACG GCGAGCCTCC AATCAATCCT 
TTCAGTGCTT CTAACTGCGA ACCCCATTCC TCTGCTGCGT CTGCACTGAA AGAAGATTCG 
TTTCAACTTT CTGAGCGAAG TGCTGCCATT GTTCGAGCCG CTAAAGCTGC GGGACACAAG 
CGATCGGATT CGATGCTCTC CGGGGACGAT GACAGCGATT TCGGGGAAGC TTCGTCTACA 
GATCGAACCG GACGAAACGC TTCGTTTGCG TACATGGAAG AGGCTTCTAT GGAAGCATCG 
CTGCTAAATC ATCTGTCGGA AGACGCTTCG GCTATGGAGA GCACTCGTGG GGGGACGCTA 
CGGCCAATGG TGACGAAATT ATCTCCAAGT GGAAGACTAG GTCGAAGGCG AACAGAAATT 
CTATCATCTG ATGAGGTATT GGTGGGAGGA GATCTGGAAG GAATAAGAAA AGCTCCCAGC 
AACGACCTTG ACGCAAGCTA TGTAGAAATG GACTTTGCTC TTGGAGACGC GTTGCCGTCG 
CCTTATGACA CAAGTGAAAC ATTTCCGATA AGAGAAACTT CGTTGATGAC CTCCACTGAA 
ATAGACGATA ATGGACCAAA GAACGTACAA GCCAAAGCCC CTGTAGTGGT TGATATCGGC 
CAGATCGGAG TTCCGAATTC TTTGTCCCCT TCGTCGTTGG AACCTACATA CGAGATCCTT 
AAGGCGTATC GGATAATTGA TGACCGTACT GTCAGTGATG ATATTTTGCC CGGAGCGGAG 
GCAAAAGTAC TCTGCAGCCT TTTTGATGGT TTTTGCTGTC CACCTCTGGA GCTCGACTCG 
GCTCGAGCAA TTCTGAAGAT GGAAATGAGT CGAATCTATT CCAAAGACGT CTCAATTCCA 
ATTCCCGAAC AACCCGTCAT ACAAATGTTG GAAAAAGATA ATCGTGTTGT TTCTTTACTG 
TTATCGGGAG TTGAGCCAAG TCCCGCGATA CTGCAACTTC CACTGCATTT TGCTGCTTCC 
TTTTTGCGAA TTCTGGTTCG ATTGCTTACA CATGAAACAG ACCCAGAATA CAATCAAACT 
TGCTTTTTGA TTGAAAAAGA CGTTTTTATT GACCGTGGCA GCCTAGAGTC ACCACCAGTA 
CACCCAGACC ACTTTACTTC TCGACCACAT ATGCTCTATA GCTCAGCTCG ATTTCAATGT 
GTGAACGCGT GGAAGGCTCA GAAGAGAGAG CTTGTTTCAG ACTCACAAAT TGCTGTAGAG 
AAGGTTTTAG ATATATGGGA ACAAGCAGCG GCAACGCCAT CGTGTGCATT GTTGCTGGGA 
CCATTGGGAC GACTACTAGG TGTCCTAGGG GCTGCTGGGG TCAACGCAAA GACGATTCGG 
CGTGTTCTGG ATCTGGGACA GGCTCTAGAG CTGCCCATTC TTGCACGAGT CTCAATCGTT 
CGGGCGCTGA CGACAGCTGC TACGGGCTCA TCGCGTTCAT TGATACTCCC TAAACTTCCA 
CCCGAGAATT TCTTTCTGTT TGGTCAGCGT GGGTTGAAAC GAAAAATTTC AGGGTTATCA 
ACTTGGCCGT TTCGAAATGA TTTCGGAGTG GCGGTCTGGT TCCGTGCCGA GCACTTTGGC 
TCCTCTTCAA ATGTAACTTT GATAAGCGCC AGGTCGGATG ATGGAGGTGG CATTGAAGTA 
AGCCTCGTCC CACTTGACGA GAAGACGAAT GATGTTTGCA CCGTCTCAGT TTCGGTATTC 
GACTCTGGAA ATGGAAACCT AGTCGCCCAC AGTGTGAAAG TTAGTGCTTG TGTCCTCCTG 
CCAAGAGTTT GGTACCACCT GGCAGTTAGA CATACTCGAT CGCGACTCAA GGGTGTCTTT 
TCGCTTTCAA CTCGACAACA AGTGTCGATA ATGGTTGACG GGAAGGTGAT GCTTACCGCA 
CCACTTCCAT TTCCAAGGAT TTCTGACTCC GATTTCGAGA AGGAGTCGAT TTTGCAGTCA 
AGTCTTCGGA GGGTAACTTT GCGATCGAGC TTGAACTTAA CTCTTGAATT TGGATCTCAG 
TTTGACGGAC AAGCTGGAAC AGTATATATA TTTAATGACA CCATCTCCGA TGCCTCTTTT 
CGTACTCTTT TCGAGCTCTC CGGTGGAAGT TCAGGCGCTC TCAAGCGATC TTCGAGTCGA 
AAAAACCGCT GGGATTCACG GCGCAGTGAA ATCGTTCGAA AGTCAAAAGC GCTCGATATG 
AAGACATTAA ATGATGAAGC CGACGAACTT GTTGTTAGTC AACGAAAGAA ATCAGGTTCT 
CGGCAAAAGG AGATGAAAGC TCGAGTAGTC GATCTTCTTG AAGCCGACGA AATAGACGAC 
AATGAGCTAG CCCTCGAGTT GCAAAACCCT TCATTCGGCT CCAAAATCTT CGTTGTCTGG 
GACCCAGAAA GAGTAACTGA TTCTTGTTTA GCAATAGAGC TACACGTAGG TGCACATGTT 
CAGCTGGAAC AGGCATATCG GTGGTTCTCT AATTCTGCGC AAGACGTCAT ATCTTATCTT 
GGTGGCATGC AGCTAAGTGT TCCTCTCTTC CGGTCTCTTT TGTCAGATAG GGCTACGGTT 
ACTCACGAGT CGCAGCGCTT AGAACTGGCG TTCGGATACT CGCTTCAGAG CCTTGTGGAT 
TTGATATCGT CTTGCGTGAA AGATCACGAT GAAAACGCAA GAGAACTACT TCGGTGTGGA 
GCCCTGGACG TGTACGAGCA TGTCTTAACT ACCTGCCGAA ATTCGTTTTT AAGCAAACCA 
GACGAAGGAT CTGTGTTTCA AGCACTGAAT TCGAACGAAA CAATTGCCAA TTCATTCGTT 
TTGTCGCTTC TTCGACTGCG ATCTGCTTGT GAGCACTATG TTGGCCTCGA GGCGAAAATC 
TTTTCTAGAT TTTTGTTCAA CTTCGGACTT TGGATCGGGA CATCGACAAC CGCATCCGCT 
CTCGACCTTG CGTTACTTCC GATTCTTGCC ATATTAACAA GATCTAACGG TGAAAAAGTC 
AGGGATTGCC TAGGCTCGAA ATATATCGTG CAAGGACTCT GCGAGTTGGA GGCGAAGGGC 
AGTACAAGCA TTGAAGTAAA CGAAATAGCT GCCAGCAAAA TTGACAAGAA AAATCTGTTT 
CTTGCAATGC TGTTTGACAT TCTCGTGATC GGAACGTCCC CTCGTGAACT TGCCCCATTT 
CTAAATTTTC TTTCGTCTAT CCTAGACGCT CAGCGATGGG AGACGATTCC AAGCGATGGT 
GGTACCAACG ATCCACATTC TTCACTTCAA GCATATACAA AACGCTTGGC AATCGATTGT 
TCCATTGTTC TCTTTATGCT TCTTCAAGTC CGACCACCAG TCAATGGCCT TTACATGAGT 
CTTGCTCATT GCTGTGGAAG CGTTCAAGGT GGTGCTGCGT GGATTTTGAG CAGTCTAGTG 
AACTCAACTG ATGACAACAT TCTCAGTTTG GGCGTGCGCT CAATATGCTC GTACTTGGAA 
CTCGCTTCGA AAGGTCCGGA TTCAGGCCTA GCGTTTGGTC CTATTCTACC CTCCGAGCCG 
GAGGCGGCCT CCGGGACAGA CGTTTCTTCG TCCGTTAGGC GAGGGGCAAA TAGGATGGCT 
CAAATTGCCA AGGGCATCGC TGCAATGGGC CCAACCGGGT CTAAGGGAAC TTCTCTGTAT 
CCAAAATTGA CCGCTAGAGT TATTTTCAAG CTGTTATGGC ACCTGCTAAG AAGCCATCGC 
TCTCATCTGG GGCCAAAAAC AAGGGTAGCT CTTCTGTTTT GGATCATGAA TGGCAACAAT 
TTGACGGTTT CGGCAATTGG ATCTATTGGG ATTCTTAGAA GATATTTTGT AACTGAGGAT 
GCCATATCTG GATACCAAAT TTCGTTCATT TGGGCAGAAA AGAAACTCTT GGAAGTGGAG 
AATATTGGCG GGCATGCCAT TCAAGATGCT TTGGCCGTTG GGACTGTGCT CCGGCTGCTT 
CGTTATCTGG ATAGTCGGGT GAAAGACCAA TGGCTCTCCG ATCTGTTAGA TCTTGCCCGC 
GGCAATAGAA AGAGTTTAAC AGTGTTGGCA TCGGTCAGTG ATTGGGAAGC AAGCTTATTT 
CACCTCGCGT CGGAAACTCT CGAAAGTTTT GTAGCTGCCC AAAATCAGGT TGATTTTGAA 
TCTAAAACAA AATCGGAGGA ATTCAACGCA ACGACCACGG AGCGATCTGA CAATATGTCT 
ACAGAGCTGT CATTTGTTTT CCATGAGCAA AACAGCGACT CGCTTGATGC TCTGAGAAGC 
CGATTGGACA CATGCATTGA TTTATATGCG ACTCTGTTAG GTCATATACT TCGAGAAGGA 
GGAAACAAAG TACGTCCTGT ACCGTGTTGC TTTGCTAGTA AAATGTTCCC CACCTCACCG 
TTCCAAATCT AGGCTCTTTC TGCTCTAGAA AACGTGTCCG CTTTGGAAAG GGTGTGTGTC 
AACGGACACA CTGTCCTTCT CCTTCTTCTA AGTAGCTTAT GTGCAAATGT GTTTGAAAAC 
GGAACTCTGC TCGAAATCGG GTCAATTAGC GCCGAAGATT GGCACGATGT CGATCTCGAA 
GCAGAGAGCC TTCCATTGAA ACAGAGCGCT CGCCTGGTAA CTGACGCTAT CTTGTCAAAC 
GGGATGAAGG GGTTGGACAT GACAACAGCT GTCCGCAGCT GGCGATCTTT AAGACATTTG 
ACCGAGGTGG TAGTTGCTCT AGCCACGAAG AGCGGGTGCG TAGATTGCGA ATGGTGATGT 
TCTGAGATGC TTCATCAAAC GTCTCATTGT CCTTTTTCGA CATCAATTGT AGCCTCGGCG 
TCGCTAGCCT CTTTGACTAT AGCAGTCAAA AAGCATCTGC AGTGGACATC GTTTCCAATG 
GACTTCACGG AATACATTTG CCTGAGTCGA AGGTGAAGGG TATCTCGGCT TACGAATATG 
GTGACATGGT GAAAGCAATA AGAGAAAGTG CGCTAGATGG GGCTGAGAAA GGACAAGATA 
TAGACCGGAG ATTATGTGTC AATATCGCTG CTCAAGTTTT AACTCTGTTA GACGCTTTCA 
TTTTTCCTGA TTCGCTTGAT TCGTCGCTTC CTGCGTCCCA TATACACGGT CTCGCTTTGG 
TTCGCAGCTC CGAACCCAGA CTAGGTCCGT CGCAAGGGAC ACTGCTCGCA TCGGCGATTC 
GATTGTCTTT GATACTTCTC GCTCTATTGG AACCGAGCAG CGTTAAGCTT TTGCAGTGCG 
CGAGCCGATT AAAGTGTCTC TTGTTTTGGG CTCTGGAACT TGTGCGAGAA GAACCAAGTT 
TGTCTGAGGT TGTGGTCCAG GGAAATATGG CGATGGTTGA CAGGCTTCTT TTGGCTACAG 
TCCTGCATTG CCACAGAGCG CTTGGGCGCT GCTCCGCGTT GCTCATAGAA GTCGAATCCA 
GTCCTTTCGA AACGTATTTT GCATCCCGAG AGGACCAGAA AAGACACCAC CGTCGCCTCT 
TACGTGTTTC TTTGGAGTTA AGGGACATTG CATCCACAGT TTTTCGAGGT CGCAACCATA 
TTCTGAAGAG TTCCCTGTCA CCTGCAGCGT ACGGCGATCT TCAAGCCAGC CTCGAAGGAG 
ACCACAGAAT TCATTCAAAG GAAGGTGTTG TTAGGGAGTT TCTCTGCAGT CGATGGGTGA 
CGAAGTATCA GGATATAGAA ACAAGAGCAG ATATTGCTGT ACCTGAGCAA GCTACGATGG 
GTACAATAGC ACTAAATAGC GAAGGACCTA CGGTGCAGGG ATTCATCGTA ATCGAAAAGT 
TAGCGCAAGA GGCTGAAGCA ATTGTCGTGG ACTATGAGAA AGCCCTGCAC AGTTGCTTTG 
AAAGCTATCT TGAAAGTCAA AGGAAATGGG CGGAAACGGA CGCTGTGCGT GACTTGGAAT 
ACGATGGCGA TACAATCACC TCGCGATTGT CCGATCGACA TGATAGTGCT ATTGCAGAGC 
TGACAAAGGC CAAGTCTCGC CGTCGCAACC GCGCCGAGCT TAGATGGCAT CGTCTCGAGC 
GGAAAGTTGT TGAACCATGG AAGCTAGCAG CTCATTGGAA GCTAGCGCAA TATAGCGATC 
CAATCGGTCG ACGGCTTCTT ATGGTTCAAA ACAGATACTT CGACTCACAC GAGGATGCGA 
GCTACGAAGT ATCTTTGGGA AAGGAACGTG ACAGGGAAGA AGAGTATCGC TCATCCGTCC 
GTCTTGAGAG AGAGAAGAAA GATCTGGCTG AAGTGATGCG TCGCAATGCT GATGCATTTA 
TCGTTGAAAA CCCTGTAATG GATTGCGAAC CTGTCGAAGA TGATACGATG CACGCTGTGA 
GTGACAGCGA AGGTTCCACC GATCTGGAAT TGGTTTCAGA CACTGAATCG AACGATGTGT 
TTGGCAGGAA AGACGCTGAT GACACTTCGG CGAATTCAGA TGGGAATCCC GATGAAGTCC 
AACGTGATGA GGAATGGGAC AAGATCGGAG CCAGCGATAT TGATAATATT GGTGCGGACG 
GTGATATCGA TGGCTGGGCG AAGATATTTA TGTGGTCAGA AAGCGAAAGC GTTGTCGCTC 
GATTTGAAAA TGTCATGCTT ATTGAGCTCC GTAGTTACAC AGAAGGAAAG GTTCTGTTGA 
CAAATCACGG TATATACTTT CGTCAGATCA GCGACGAAAT GAATGTAATG ACCAAGGAAC 
CGCTGGGAAT GGACGATACT GGACCCTCAG AGACAAAAGA TCGACGCTGG AGACTGTGTC 
GCCTGTCGGA AATTCAGGGT CGAAGATACA TGCTTCGACA GCAAGCTCTG GAAATGTTTT 
TTGCAGATGG ACAAGAGCTT TTCATCAATT TTCCTGCGGG TGGAAAAGAC AGAGATCGAT 
TTTATGCCAA GATACGAAAT AGCTGCAAG 

 

Protein sequence

MVRSDDESDF DQNGEPPINP FSASNCEPHS SAASALKEDS FQLSERSAAI VRAAKAAGHK 
RSDSMLSGDD DSDFGEASST DRTGRNASFA YMEEASMEAS LLNHLSEDAS AMESTRGGTL 
RPMVTKLSPS GRLGRRRTEI LSSDEVLVGG DLEGIRKAPS NDLDASYVEM DFALGDALPS 
PYDTSETFPI RETSLMTSTE IDDNGPKNVQ AKAPVVVDIG QIGVPNSLSP SSLEPTYEIL 
KAYRIIDDRT VSDDILPGAE AKVLCSLFDG FCCPPLELDS ARAILKMEMS RIYSKDVSIP 
IPEQPVIQML EKDNRVVSLL LSGVEPSPAI LQLPLHFAAS FLRILVRLLT HETDPEYNQT 
CFLIEKDVFI DRGSLESPPV HPDHFTSRPH MLYSSARFQC VNAWKAQKRE LVSDSQIAVE 
KVLDIWEQAA ATPSCALLLG PLGRLLGVLG AAGVNAKTIR RVLDLGQALE LPILARVSIV 
RALTTAATGS SRSLILPKLP PENFFLFGQR GLKRKISGLS TWPFRNDFGV AVWFRAEHFG 
SSSNVTLISA RSDDGGGIEV SLVPLDEKTN DVCTVSVSVF DSGNGNLVAH SVKVSACVLL 
PRVWYHLAVR HTRSRLKGVF SLSTRQQVSI MVDGKVMLTA PLPFPRISDS DFEKESILQS 
SLRRVTLRSS LNLTLEFGSQ FDGQAGTVYI FNDTISDASF RTLFELSGGS SGALKRSSSR 
KNRWDSRRSE IVRKSKALDM KTLNDEADEL VVSQRKKSGS RQKEMKARVV DLLEADEIDD 
NELALELQNP SFGSKIFVVW DPERVTDSCL AIELHVGAHV QLEQAYRWFS NSAQDVISYL 
GGMQLSVPLF RSLLSDRATV THESQRLELA FGYSLQSLVD LISSCVKDHD ENARELLRCG 
ALDVYEHVLT TCRNSFLSKP DEGSVFQALN SNETIANSFV LSLLRLRSAC EHYVGLEAKI 
FSRFLFNFGL WIGTSTTASA LDLALLPILA ILTRSNGEKV RDCLGSKYIV QGLCELEAKG 
STSIEVNEIA ASKIDKKNLF LAMLFDILVI GTSPRELAPF LNFLSSILDA QRWETIPSDG 
GTNDPHSSLQ AYTKRLAIDC SIVLFMLLQV RPPVNGLYMS LAHCCGSVQG GAAWILSSLV 
NSTDDNILSL GVRSICSYLE LASKGPDSGL AFGPILPSEP EAASGTDVSS SVRRGANRMA 
QIAKGIAAMG PTGSKGTSLY PKLTARVIFK LLWHLLRSHR SHLGPKTRVA LLFWIMNGNN 
LTVSAIGSIG ILRRYFVTED AISGYQISFI WAEKKLLEVE NIGGHAIQDA LAVGTVLRLL 
RYLDSRVKDQ WLSDLLDLAR GNRKSLTVLA SVSDWEASLF HLASETLESF VAAQNQVDFE 
SKTKSEEFNA TTTERSDNMS TELSFVFHEQ NSDSLDALRS RLDTCIDLYA TLLGHILREG 
GNKALSALEN VSALERVCVN GHTVLLLLLS SLCANVFENG TLLEIGSISA EDWHDVDLEA 
ESLPLKQSAR LVTDAILSNG MKGLDMTTAV RSWRSLRHLT EVVVALATKS GLGVASLFDY 
SSQKASAVDI VSNGLHGIHL PESKVKGISA YEYGDMVKAI RESALDGAEK GQDIDRRLCV 
NIAAQVLTLL DAFIFPDSLD SSLPASHIHG LALVRSSEPR LGPSQGTLLA SAIRLSLILL 
ALLEPSSVKL LQCASRLKCL LFWALELVRE EPSLSEVVVQ GNMAMVDRLL LATVLHCHRA 
LGRCSALLIE VESSPFETYF ASREDQKRHH RRLLRVSLEL RDIASTVFRG RNHILKSSLS 
PAAYGDLQAS LEGDHRIHSK EGVVREFLCS RWVTKYQDIE TRADIAVPEQ ATMGTIALNS 
EGPTVQGFIV IEKLAQEAEA IVVDYEKALH SCFESYLESQ RKWAETDAVR DLEYDGDTIT 
SRLSDRHDSA IAELTKAKSR RRNRAELRWH RLERKVVEPW KLAAHWKLAQ YSDPIGRRLL 
MVQNRYFDSH EDASYEVSLG KERDREEEYR SSVRLEREKK DLAEVMRRNA DAFIVENPVM 
DCEPVEDDTM HAVSDSEGST DLELVSDTES NDVFGRKDAD DTSANSDGNP DEVQRDEEWD 
KIGASDIDNI GADGDIDGWA KIFMWSESES VVARFENVML IELRSYTEGK VLLTNHGIYF 
RQISDEMNVM TKEPLGMDDT GPSETKDRRW RLCRLSEIQG RRYMLRQQAL EMFFADGQEL 
FINFPAGGKD RDRFYAKIRN SCK