Gene PHATRDRAFT_40672 details

Gene Information

• Locus tag: PHATRDRAFT_40672
• ID: 7198582
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011693
• Strand: -
• Start bp: 110788
• End bp: 114479
• Gene Length: 3692 bp
• Protein Length: 1034 aa
• GC content: 60%
• Product: predicted protein
• Protein accession: XP_002184736
• Protein GI: 219129102

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTAGCAG CGATTTCGCC TCGAAAGTAG ATCACCAAGG ATTTCGAGGG GTAAGCTCGC 
TACGGCGGAG CCCCTCAAAC CGGCATTTCG CTCGGAGACT CGGAAGGATT CAGGCTCGGC 
ATTGCCGAAG GTTCTGTACT CGGTTCCAAG GATGGCACTG CACTCGGATC AGCCGAAGGT 
ATTGCGGAAG GCGCCGCACT CGGACCGGCC GATGGAACAG CTGAAGGCAT TGCACTTGGT 
ATAGCAGAAG GGACCGCACT CGGATCAGCC GATGGAGCCG CGCTGGGAAC CGCTGATGGC 
ATCGCGGACG GAACACCAGA GGGGACCGCC GATGGAGCTT GGCTTGGAAC TGCCGAAGGC 
ATAGCGCTGG GAACAGCTGA AGGTTGTGCC GATGGAGCCG CGCTAGGGAT CGCTGAAGGC 
ATCGCGGACG GAACACCAGA GGGGACCGCC GATGGAGCTT GGCTTGGAAC TGCCGAAGGC 
ATAGCGCTGG GAACAGCTGA AGGTTGTGCC GATGGAGCCG CGCTGGGAAC CGCTGATGGC 
ATCGCGGACG GAACACCAGA GGGGACCGCC GATGGAGCTT GACTTGGAAC TGCCGAAGGC 
ATAGCGCTGG GAACAGCTGA AGGTTGTGCC GATGGAGCCG CGCTGGGAAC CGCTGAAGGT 
TGTGCCGATG GAGCCGCGCT GGGAACAGCT GAAGGTTGTG CCGATGGAGC CGCGCTAGGG 
ACCGCTGAAG GCATCGCGGA CGGAACACCA GAGGGGACCG CCGATGGAGC TTGACTTGGA 
ACTGCCGAAG GCATAGCGCT GGGAACAGCT GAAGGTTGTG CCGATGGAGC CGTGCTAGGA 
ACCGCTGAAG GCATCGCGGA CGGAACACCG GACGGGACCG CCGATGGAGC TTGGCTGGGA 
ACTGCCGAAG GCATAGCGCT GGGAACAGCT GAAGGTTGTG CCGATGGAGC CGCGCTGGGA 
ACCGCTGAAG GTTGTGCCGA TGGAGCCGCG CTGGGAACAG CTGAAGGTTG TGCCGATGGA 
GCCGCGCTAG GGACCGCTGA AGGCATCGCG GACGGAACAC CAGAGGGGAC CGCCGATGGA 
GCTTGACTTG GAACTGCCGA AGGCATAGCG CTGGGAACAG CTGAAGGTTG TGCCGATGGA 
GCCGTGCTAG GAACCGCTGA AGGCATCGCG GACGGAACAC CGGACGGGAC CGCCGATGGA 
GCTTGGCTGG GAACTGCCGA AGGCATAGCG CTGGGAACAG CTGAAGGTTG TGCCGATGGA 
GCCGCGCTGG GAACCGCTGA AGGTTGTGCC GATGGAGCCG CGCTAGGAAC CGCTGAAGGC 
ATCGCGGACG GCACAACCGA TGGGACCGCC GATGGAGCTT GGCTTGGAAC TGCCGAAGGC 
ATAGCTGAGG GAACAGCTGA AGGTTGTGCC GAAGGCATCT CGGAAGGAAC CGCTGAAGGT 
TGTGCGGATG GAGCAGCGCT GGGAACCGCT GATGGCATCG CGGACGGCAC AACCGACGGG 
ACCGCCGATG GAGCTTGGCT TGGAACTGCC GAAGGCATAG CGGACGGCAC AACCGACGGG 
ACCGCCGATG GAGCCTCACT CGGAACTGCC GAAGGCATAG CGGAGGGAAC GACGGAAGGA 
ACAGCCGACG GCATCGCGGA GGGAACCGCT GAAGGTAGTG CCGATGGAGC CGCGCTGGGA 
ACTGCTGAAG GCATCGCAGA CGGCACAGCT GACGGGACCG CCGATGGAGC CTCACTCGGA 
ACTGCCGAAG GCATAGCTGA GGGAACAGCT GAAGGTTGTG CCGAAGGCAT CTCGGAAGGA 
ACCGCTGAAG GTTGTGCTGA CGGAGCCGCG CTGGGAATCG CTGAAGGCAT CGCGGACGGC 
ACAACCGACG GGACCGCCGA TGGAGCCTCG CTTGGAACTG CCGAAGGCAT AGCGGACGGC 
ACAACCGACG GGACCGCCGA TGGAGCTTCA CTCGGAACTG CCGAAGGCAT AGCGGAGGGA 
ACGACGGAAG GAACAGCCGA CGGCATCGCG GAGGGAACCG CTGAAGGTAG TGCCGATGGA 
GCCGCGCTGG GAACTGCTGA AGGCATCGCA GACGGCACAG CTGACGGGAC CGCCGATGGA 
GCCTCACTCG GAACTGCCGA AGGCATAGCT GAGGGAACAG CTGAAGGTTG TGCCGAAGGC 
ATCTCGGAAG GAACCGCTGA AGGTTGTGCT GACGGAGCCG CGCTGGGAAT CGCTGAAGGC 
ATCGCGGACG GCACAACCGA CGGGACCGCC GATGGAGCCT CGCTTGGAAC TGCCGAAGGC 
ATAGCTGAGG GAACGACGGA AGGAACTGCC GAAGGCATCG CGGAGGGACC TGTTGAAGGT 
AATGCTGACG GAGCCGCGCT GGGAATCGCT GAAGGCATCG CGGACGGCAC AACCGACGGG 
ACCGCCGATG GAGCTTCGGA CGGAGATGCC GAAGGGAGCG CACTCGGAAC CGCCGACGGT 
AGGGCGGAAG GAAGCTCCGA TGGCTCTGCA GATGGGAGCG AGGTCGGAAC CTCGGACGGA 
GATGCAGAGG GGAGCTCACT CGGAACGGCT GAGGGGACGG CAGAGGGTAC ATCCGAAGGG 
AATTGCGAAG GAGCCTGCGA AGGAACTTCA GACGGAGCGC TGGATGGTGG AGCGCTGATA 
GTGGGGGACT GTGATGGAGA GTCCGATGGA AACGCGGAAG GGAAGTCAGA CGGAGCTACA 
GAAGGAACTT CCGAAGGCAC ATCCGAAGGG ACTGCTGATG GTGTCAGTGT TGGGGTTTCA 
GAAGGAACCC CCGAAGGAAA ATCCGAAAAG ACCCCGGTCG GTGTCTGCGA GGGGCTGTCA 
GAAGCATTTT GCGAGGGTGA TGTCGATGGA GACCGCGATG GCGCCTCGGA CTTTTTGCTT 
TTGGCACTCT TCTTGCTTTG CTTCGAATTA TCCATCATAC CCTTTGTACT TTTCGGATTC 
GGTACGGTAG GGACACGTGT GGGTAGAACC AGGCTAGGAC CCCCCGAAGG CAACACGGGA 
GGAGCCTGGG TAGGCATCTC AATGGGAATA ATCGTAGGCA GCGTCGAAGG TGCCCCCGAA 
GGGTTTGCCA AGGATGGAGA AGGGGTAGGA GCAAGCAGAA GCATGGTGGG AACGGACGAC 
GGTACGTCCG ACTTCTTGCT CTTCGTGCTT TTGGCTCCTC CCTTTCCATC CTTGCCGCTA 
CTCTTTCCAT CCTTACCGCT ACCCTTGCCT TCTCCATCGC CAGCTTTCTT ATTATTCGAG 
GGAGGCATCG CCTTGCCTCC GTTATTGGAG ACGACGTTGA TGACGCTCGT TAAAACAGGA 
TGCTTCCTCA GCTGCCGCAT TGCTCCGATA TCTTCCGCCG ACTCTACTGA AGAGCAGCCA 
GCCGAAACGA CACCCAGCAA GGCTAAGGTG GAGAATCGCA TGATGCGTGG ATCGATACAA 
ACGGGAGACT TAGCGATCAA TGGCGCTCTA ATTTTTGCGT TACCGTATGT TTTTGGTTAG 
TCCAACGGCA AAATACGAGG AAAGTTCGAT CCGCTTGGAT TGGTTTGTTG GCTTGGTTTG 
CAAAGTGCTC CAACGAGCGA TGCATGTGGT CTTTTATGTC GAGAATCGTG TTTAGGAATA 
AGCGATTGAC AACGGGCGAA CGCTGCCCTC GAACACATAA TTCGGAAGAT TTAATACTTC 
TATGCTCCTC CCACAGAGTA GTTGCGACTT GA 

 

Protein sequence

MVAAISPRKL GIAEGSVLGS KDGTALGSAE GIAEGAALGP ADGTAEGIAL GIAEGTALGS 
ADGAALGTAD GIADGTPEGT ADGAWLGTAE GIALGTAEGC ADGAALGIAE GIADGTPEGT 
ADGAWLGTAE GIALGTAEGI ALGTAEGCAD GAALGTAEGC ADGAALGTAE GIALGTAEGC 
ADGAVLGTAE GIADGTPDGT ADGAWLGTAE GIALGTAEGC ADGAALGTAE GCADGAALGT 
AEGIALGTAE GCADGAVLGT AEGIADGTPD GTADGAWLGT AEGIALGTAE GCADGAALGT 
AEGCADGAAL GTAEGIADGT TDGTADGAWL GTAEGIAEGT AEGCAEGISE GTAEGCADGA 
ALGTADGIAD GTTDGTADGA WLGTAEGIAD GTTDGTADGA SLGTAEGIAE GTTEGTADGI 
AEGTAEGSAD GAALGTAEGI ADGTADGTAD GASLGTAEGI AEGTAEGCAE GISEGTAEGC 
ADGAALGIAE GIADGTTDGT ADGASLGTAE GIADGTTDGT ADGASLGTAE GIAEGTTEGT 
ADGIAEGTAE GSADGAALGT AEGIADGTAD GTADGASLGT AEGIAEGTAE GCAEGISEGT 
AEGCADGAAL GIAEGIADGT TDGTADGASL GTAEGIAEGT TEGTAEGIAE GPVEGNADGA 
ALGIAEGIAD GTTDGTADGA SDGDAEGSAL GTADGRAEGS SDGSADGSEV GTSDGDAEGS 
SLGTAEGTAE GTSEGNCEGA CEGTSDGALD GGALIVGDCD GESDGNAEGK SDGATEGTSE 
GTSEGTADGV SVGVSEGTPE GKSEKTPVGV CEGLSEAFCE GDVDGDRDGA SDFLLLALFL 
LCFELSIIPF VLFGFGTVGT RVGRTRLGPP EGNTGGAWVG ISMGIIVGSV EGAPEGFAKD 
GEGVGASRSM VGTDDGTSDF LLFVLLAPPF PSLPLLFPSL PLPLPSPSPA FLLFEGGIAL 
PPLLETTLMT LVKTGCFLSC RIAPISSADS TEEQPAETTP SKAKVENRMM RGSIQTGDLA 
INGALIFALP VVAT