Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_23639 |
Symbol | |
ID | 7198551 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011693 |
Strand | - |
Start bp | 437233 |
End bp | 439791 |
Gene Length | 2559 bp |
Protein Length | 712 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | precursor of phosphorylase udp-glucose diphosphorylase |
Protein accession | XP_002184804 |
Protein GI | 219129244 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.910719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTCAAGCTCT GACTCTAGGT ACATTTCGGT ACAGAGATCA ATCAAGTATA GGATTCACAG TTATCTTCGT ACGTCTTTCG GAACCGCTTG GCTTTTGTGC GTCTTCGAAT TGACACTGCC CAATTCCTGA TTCAAGAAAG CGCGAGACTA TCGTGACGGC AAATTGCCAA CAACAACAAC AACAACATGA GACTAGCCAT TGCTGTTTCC TTTTTGCTCT TATGGAGCAC CGCATCGTCG TTCGGAACCC CGGCCAAAAA CCAAAGTGAT CGTTCATCCT GGAGAGCGAC GACGAGATTA TCCCACTCGT CTCTACTCGG GTTCACGTCC TCTCGCCCGT TTGCGTCGTT CGGTCTTCGG GGTGGGGGAA CGCCATCAAC CTTGACCTCG GCCTTGCATC TGTCGTCGTC TTCGACTAGC AGCGATCGCT TGACGGACGA GAATCTGGCC CTTTTGTCGC CACGAGGACG GAACGCCTTG GAGCGTCTCG TGGAGTACGA CACGGATGGC GCACAGCAAC ACGTATACGG ACACTGGCCC CCTCCCGGAC TACACGACTC CGACAAACAA CGTCTGGCCG AACAAGTACG TAAATCAAAC ATCTGAGCTA GTCTTGCGTT GCCAAATCCA TATACGGACG CGGGGCTGTC AACTCTGAAT CGCACTCACG GAACAAATCC ATTTGTACAT ACTATCCGTA GTTGGCTGAT TTGGAAGAAT CCTATCCTGG AGGCTTACCA GCCTACCTTT CCAAAGCCAA AGTGCTGTTG CGAGAATCTG CTGAAGGACT CAATCCTTTC GATGAATACG AAGCCGTCGT GCCGCAAGGC GAATCCCTCA GCTACGACAA CGAACCAGCC ACCAGCACCA TGGCTTTTGC CGACGCGGAA CAAGCTGGCC TCGACGTCTG CGGTACCGCC GTTTTTGTCC TCGTTGCCGG CGGGTTGGGT GAACGCCTTG GCTATTCCGG TATCAAACTG TCACTTGAGA CTAACCTGTG TACCAACAAG TCGTATTTGG AAACCTATGT GCGCTATATA CAAGCCATGC AGTATACAGC TCGGCAACGG ACGGGCAATG AACAGTTGAG AATCCCACTC GTCATTATGA CTTCCGGAGA TACAGATCCC TTGACACGAC AGCTCCTCGA GGACAATAAG TATTTCGGCA TGGACATTGA CATGGTTACT ATTGTCACGC AAGACAAGGT GGCGGCTTTG AAAGACGGCG CCGCCGGGTT GGCCCTGGAC GACAAAGATC GATGGACCGT GGAGACGAAA CCACACGGGC ACGGCGACGT ACACCACCTT CTGTACCGCG AGGGGCTTGT GGATCAGTGG CAGGACCAAG GCAAAACTCA CGTGGTCTTC TTGCAAGATA CCAATGCTTT AGTGATCAAT TCTGTCGTTC CGGCCTTGGG TGTCAGTGTC ACCCGCGGCT TTCACATGAA TTCCATTTGC ATACCGAGAC TGGCGGGTGA AGCAGCGGGT GCCATTGCTC GGCTCGAGTA CGTATAGTAT GCCATTTCCG CATTTGCGTG TGATAAGGAA TAGTTTGAGA ACTTCATCGA AACCAATCTG ACCCGTGTCG GCCTGCTTAC AAACGTGCTT CCTCCACTGC AACAGACACA AAACGGATCC CAACAAATCA CTAGTGATTA ACGTGGAATA TAACCAATTG GATCCGTTGC TGCGCACTCA AGGTGATGGC AAGGGAGATG TTGCCGATCC GGAAACGGGA TATTCTCCCT TTCCAGGAAA CGCCAATAAT CTAATTATTG AACTAACGGC GTACGGCAAA ACGCTGCGTG GGGAGGACCA GGGTGTTGTG CTGGAATTTG TCAATCCAAA ATATAAGGAT GCCAGTCGGA CCGAATTCAA AAAGCCGACA CGTCTGGAAT GTATGATGCA GGATATTCCA AAGCTCTTCC AAAAGGAAAT GGGCGCCGAA GCGAACATTG GGTTCACCTT GTTTGATCGA TGGTTTACCT TTTCGCCAGC CAAGAATGCT TTGGATGCTG GCCAAGACGC TGTCGAGGCC GGAAGTACGG CGCCCGGTAC CATGTCGAGT GCAGAATCGG ATAAGTATAT TCAGAACCAA CGCAAGCTGG CTTCGCTCGG CGTCAAGGTT CCAGTCACGA TGGCGGACGA TTTAGTCGTC GTGGGGGGCA TTCCGGTGAC GCCCGGTCCA CGGATTGTTT TGGGTTCAGC CTTTGGTATC TCACAAGAAG CATACCGGGA GAAGATTCAG GGGGAGATGG AACTCACGCA GCGATCCGCG CTCGTGATGG ACGGACATCA CTTGACAATT AAGAGTTTGA AAGTGGACGG AGCTTTAGTG ATTCGGACGG GCAAAGACAC GTTCGTCACA GTCGATGGTT TAGTGGTCAC AAATAAGGGA TGGGAGCTGC AAGAGTTGGA TCCTGAGCAG AATTATCCGG AACACGTAGC GATTCGGGGC TACACCATGA CCAAACACGA GACTACCGAG TATCTTCTCG ATGAACCCGG CCACTTTGTC ATCGATGCTT CCGGAAATGT GCAAAAGGCG GCAGAGTAA
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Protein sequence | MRLAIAVSFL LLWSTASSFG TPAKNQSDRS SWRATTRLSH SSLLGFTSSR PFASFGLRGG GTPSTLTSAL HLSSSSTSSD RLTDENLALL SPRGRNALER LVEYDTDGAQ QHVYGHWPPP GLHDSDKQRL AEQLADLEES YPGGLPAYLS KAKVLLRESA EGLNPFDEYE AVVPQGESLS YDNEPATSTM AFADAEQAGL DVCGTAVFVL VAGGLGERLG YSGIKLSLET NLCTNKSYLE TYVRYIQAMQ YTARQRTGNE QLRIPLVIMT SGDTDPLTRQ LLEDNKYFGM DIDMVTIVTQ DKVAALKDGA AGLALDDKDR WTVETKPHGH GDVHHLLYRE GLVDQWQDQG KTHVVFLQDT NALVINSVVP ALGVSVTRGF HMNSICIPRL AGEAAGAIAR LEHKTDPNKS LVINVEYNQL DPLLRTQGDG KGDVADPETG YSPFPGNANN LIIELTAYGK TLRGEDQGVV LEFVNPKYKD ASRTEFKKPT RLECMMQDIP KLFQKEMGAE ANIGFTLFDR WFTFSPAKNA LDAGQDAVEA GSTAPGTMSS AESDKYIQNQ RKLASLGVKV PVTMADDLVV VGGIPVTPGP RIVLGSAFGI SQEAYREKIQ GEMELTQRSA LVMDGHHLTI KSLKVDGALV IRTGKDTFVT VDGLVVTNKG WELQELDPEQ NYPEHVAIRG YTMTKHETTE YLLDEPGHFV IDASGNVQKA AE
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