Gene PHATRDRAFT_55097 details

Gene Information

• Locus tag: PHATRDRAFT_55097
• ID: 7198341
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011692
• Strand: -
• Start bp: 167199
• End bp: 169349
• Gene Length: 2151 bp
• Protein Length: 454 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002184577
• Protein GI: 219128768

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGCTCACCAG AACCTGGAGC TCTCACCAAT AATGCTTTCA GATAGACAAC TTTACTGTTA 
AGGCTACGTA CTGCCCGGTC CGGTCCGGTT GCGAATTCCT ATACGTGCCG AGAACACAAC 
TCTAGTAGTA GGGCCATTTT TCCTAGACAG CTTTCACAAG AAACTGGAGC TCTCACCAAT 
GCTGCTTTCG GATAAATAAC TTCACTGTTA AGGCTATTTA CCGCCCATTC CGATTGCGAA 
TTCCCTATAC GTGCCTCAAA CCGTGGATCT TTTGAAGGTG CAGATGCCAG TTCACTGTTA 
GCGTGTATGA TTTGGTTCGC TGTTAACGCA AGCAGTTTCT ATACCAGTGG TCGGTGAAGT 
TTTCTTGTTT GCAAACCACT TTTCACTTCT TGACACACTT TCCGCATCCA AACTTTTGAG 
CTGTCGACCA AGATCATGAA ATCTCTCAGC CTTGTCGCTA TCTTGGCCGC AGGAGTATTC 
GTCCCCGGCT ACGACGCGCT CAAGCCTTCA AAGTGTGGCG GAAAGCTTAC GAGTCCTTGC 
CTCAGTGCAT CCGATACAAG GTACGATGCA AACTTTCCCA AATCAATCAC TCTGCAAAAT 
CCGGCATGGA AGCAATTCGA GGGCTTGTGG AAGACGACCT CAATCAATTT CCAAGGAAAC 
GGAATCGTGG CGCAGCCTCA ACCACATATT CCTGCATTGA AATACGCGAC TCTTCCGTAC 
ACTCTGAATG AGGTTGTAAC CTTCTACAAT CATACCATTG TCGGATCGAG AATGTCGCTT 
TATGCATATT TTTTCTATTC CCCGGCCCCA GAATCATTCT GCAACCAAAC ATTCAATCCG 
CCTTTCGAAA ATGTTATTGG GTCAGGAGTT TGCGGTGTGA ATGGATTTAC CACTGCCGTT 
GCCCAGTTTG GGACAAGTAC CCACGAAAAT CAAGGTGAGC AAAAACAGTA TGCAAGCTTT 
GGGTTCCCTG GCGCTACAAG TCCCTCTCAC ATGTCCCATA TTTAACTTGC TGATCAGGCG 
ACGTTGATTT TTTTCGTCTT CGGACTTCTG CTGCTCTCGG TCCGGTCACA ATTGATTTCG 
ATTCAGGACT ATTCACTTGG ATTGATTCCA ACTCTTTGCT TGCAACGAAT ACACTTGATG 
GCCTTTTCAG TCAAAGCAAT CCATACACCT TCCTTGACAA CAGCTCAGCC TTTGTCAACT 
TCAATGTAAT TGATCTTGTA AGGAGGACTA GAGACACCAA TGCCCTTGCT CAGATGACTC 
GAATGGAGGA GAGTGAGTGG CTCGCGGCTA TCGAGGAAGC GTACCAAGAT GTCAACATTG 
CAGCTGCAGA CAAAATCCCT GTTCCCTTCC AGACTTCTTC TTCGGATCCA GAATGGTATC 
CAACAGAAGA TGAATGGTGC GGTGGAGTTG GTAACGACCC AGAGTGCACT GTATCCCCAT 
ATCAAGAACC AGATGCCAAG TTAAAATCTA GTGCTTTGGT AGGGTTCGTT ATCCTTGGCC 
TCGCTGTGTT CTGCATTCCT TTGTATGCAC TATACCGATA CCGAATTGGC CAACAGGAAC 
GCCGCATCAA GGACAAATTC ATTCGAGGTA TTGCCAAAAA CATGTCCATT GCTCCTAGCG 
CTGGGGCGAT ATCCCGCGAC AAATTGGTGG AAGAATTCCA GCGCATTGAT AAAGACAAGG 
GCGGGACCAT TGAGAAAGCC GGTAAGTCAC GGATAATGAA CAACTTTGAC GATATTCCCT 
GTGACAAAAG TAGGATGCAA CTTACCCAGT ACTCTCTACA GAACTCAAGG ACTGGATAGA 
CGAGGGGAAG TTGGGAACAA TTTCAGACGC TGATTTTAAT GCATTGTGGA GTGCTTTGGA 
TAGGGACGGT TCCGGTAATA TTGATTTCAT GGAGTTCTGC ACTTTCCTCA GTGGTTGCAG 
CGAGGCGTTC GACAATGTTT ACGACGAGCA GCAGAAAATG TGAGTTTCCT CTCTTAGGGA 
GGGACGCCTT CTCTTGTCAA CTTTTATCAA TGGTGAATCA AAGGACCATC AACTCTAGGT 
CTTCATTAGG AGGGTAAAAC GAAGAAGAGC AATTTATGTA TGAGTGAACA TGGAAGGATG 
TCAAAAAAAC CTAATTTAAA GTCTGTAATA ACGAAATTGA GAACTAGTAG T 

 

Protein sequence

MKSLSLVAIL AAGVFVPGYD ALKPSKCGGK LTSPCLSASD TRYDANFPKS ITLQNPAWKQ 
FEGLWKTTSI NFQGNGIVAQ PQPHIPALKY ATLPYTLNEV VTFYNHTIVG SRMSLYAYFF 
YSPAPESFCN QTFNPPFENV IGSGVCGVNG FTTAVAQFGT STHENQGDVD FFRLRTSAAL 
GPVTIDFDSG LFTWIDSNSL LATNTLDGLF SQSNPYTFLD NSSAFVNFNV IDLVRRTRDT 
NALAQMTRME ESEWLAAIEE AYQDVNIAAA DKIPVPFQTS SSDPEWYPTE DEWCGGVGND 
PECTVSPYQE PDAKLKSSAL VGFVILGLAV FCIPLYALYR YRIGQQERRI KDKFIRGIAK 
NMSIAPSAGA ISRDKLVEEF QRIDKDKGGT IEKAELKDWI DEGKLGTISD ADFNALWSAL 
DRDGSGNIDF MEFCTFLSGC SEAFDNVYDE QQKM