Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49805 |
Symbol | |
ID | 7198466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011692 |
Strand | - |
Start bp | 374085 |
End bp | 375533 |
Gene Length | 1449 bp |
Protein Length | 389 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184607 |
Protein GI | 219128831 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.193845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTTTCTGTC AGGAGCGTTG ATAGGATTGG TCGATTGCAA AAGGGACGCG CTCATTGTCA CAGTCAGCTA ATCGGCATAC AGCGTGAAAG TACACCCGCC GCTATATACC AAATCCTGAA TCAATGCGAC AAACTTTTCT GGCGACCGAC GAATTTCGAC GAGCCTCTCA TTTTTTCGAT GGAAGTCTAA TACAAATCTC TGTTTTCAGC TCCATGCGCT TACCAGCATA ATCATGCATT GTGCAAGATT GTATATCACG CTAGCTTCCA AATTTCGAAA TGACCAATCC GATGGCGGAA CTTTGCGGTC GAGCGATTGG AGCGGTTGCC GCTCCGGTGG TAGAATGTCT CGACGTGGAC GGCGTCGTAC GTAAAGTGGA CGTGAACAGT CTGTTGCAAC GTATAGACAT GAATGAGTTG CTGGACAAGG TTGACATCGA TCGGCTGTTA GATAGGGTTG ATCTGAACCG ACATGTTGCC AAAGTGGACA TCAACTCGGT ATTGGAGCGG GTAGACGTCA ACGATATTGT TGGCCGGTCC GATATGGGAG CGATCATTGC GCAATCCACG ACCGGCGTCT TTTCGCAGGT TCTGGACAAA CTACGTACAC AGCTGGTTGT GGCAGATTTG ATTTTCTTTC GTATGCGCCG CTTCCAATGG AGCCACGCAA ACGGTGGGCG CCTGCCGCCG TCTCCCGGTC CTACCGCTAT CAATGGACCT CGCGCTGCTC GCTGTCCCAA AGTACGCATC GACCAAGCCA TTGCCGTACA AGGTCACTTC ACCGGCTTCA TTTCCAAAGC CGTTGCGATA TTTTTGGATA CTTTGTTTGT AACACTCAGT TTTGCGGGCA TTATCATTGT CCTACAACTC TGTTGGATTC TGTTTGTCAG GGATACGGAC GCAGATACAG TACGGAAAAA AGTCAGTCGT GACACCCTGT GGGTTTTTGT CATGTACTGT GTATACTGGG TACTCTGCTT TTTCTTGACC GTCCTTGTTA CCGGACAGAC TCTCGGCATG GCCATTGTCG GCATCAAGGT CGTCTGCAGC CGCACCGGCG AGGATGTATC GCTGCGACAA GCGATGGTGC GCACCGCGAT CCTACCTCTG ACGACGACCG TGCTGCCCAT ATTGGGGATC ATGGGAATAA CCCGTCGCGA CGGTCGCTTG TTGCACGATG TTGTGGCCGG AACGGGAATT GTGTACGCGT GGGATGCTCG CATGGCCAAG GTCCGTGCCG TTGCCATGAA ACGCGTTCAC CAGACTCGGG CGGAACACTA CCAGCGGGGC AGCAGTACGG ACGAAGCCCA AGAGGCCGAG GCCGCGGCCA CGGGAACCAA TCCAGGCGCA GCTTTGTTGG AAGAAGTTTC GTACGATGAT GCCAGCATGA GTGAACCGTC GACGTCGGCT TCGTTCTCCT ACGCCACTTT TCGAGGCGAA TCGTCATGA
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Protein sequence | MTNPMAELCG RAIGAVAAPV VECLDVDGVV RKVDVNSLLQ RIDMNELLDK VDIDRLLDRV DLNRHVAKVD INSVLERVDV NDIVGRSDMG AIIAQSTTGV FSQVLDKLRT QLVVADLIFF RMRRFQWSHA NGGRLPPSPG PTAINGPRAA RCPKVRIDQA IAVQGHFTGF ISKAVAIFLD TLFVTLSFAG IIIVLQLCWI LFVRDTDADT VRKKVSRDTL WVFVMYCVYW VLCFFLTVLV TGQTLGMAIV GIKVVCSRTG EDVSLRQAMV RTAILPLTTT VLPILGIMGI TRRDGRLLHD VVAGTGIVYA WDARMAKVRA VAMKRVHQTR AEHYQRGSST DEAQEAEAAA TGTNPGAALL EEVSYDDASM SEPSTSASFS YATFRGESS
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