Gene PHATRDRAFT_49787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49787 
Symbol 
ID7198360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011692 
Strand
Start bp290081 
End bp290850 
Gene Length770 bp 
Protein Length153 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184596 
Protein GI219128808 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.293303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCAGCACGAA TTCATCCTGT CACAAAGGGG GTTTGTTGGG ATCAGCTTTT ACTCGCAAGC 
CGCCGAAGAG ATTTCGGACA ACGAAGAACC CCACGAGCCG TTGTTCTCGG GCAAAGCTGC
GAATGAGCAA GCACTCGGTC CGGCACAGTG CATTCTAGAA AAAAAAGATG TTCTCGCTGT
CCGGGCATGT TGCCAAGCCC GTCAGCCAGA AGAAGATATC GTAGCGTTTT ACCAATCCTA
TTGCACGGAG ACGCCGCCTT TGCCGGGCAA GGGGTAGTCT ACGAGACCAT GCAAATGGCC
GAGGTGCCCG ATTTTGATGT TGGTGGAACC ATTCACGTCA TCATCAACAA TCAGATTGGC
TTTACCACCA ACCCCCTACA TTCGCTCTCA ATGCCCTACT CGTCGACGTT GGGCAAGGCC
TTCAATTGCC CCATCTTTCA CTGCAACGGC GACGATCCCC TGGCAGTATC GACGGCACTC
GAGACCGCCG TCGAATGGCG TCACGAATGG GGCATGGATG TCATTATCGA GATGGTCTGC
TACCGTCGTA ATGGTCCCAA CAAATTGGAT CAGCCGGCCT TTACACAACC CAAACTCTAT
AAGGAAATCT CTCAACACCC ACCAACCCTG GATATTTTCG AAAAGTGATT GATTGAAGAA
GGAACCTTAT CCAAAGAAGA TGTTAAGAGA TCCGTGACTT TACGCTGGAA AGCTACGAGA
AGGATTTGGA AGCTTCCAAG ATGTATGTGG AAAAGGAGGC GGATTGGTTG
 
Protein sequence
MLPSPSARRR YRSVLPILLH GDAAFAGQGV VYETMQMAEV PDFDVGGTIH VIINNQIGFT 
TNPLHSLSMP YSSTLGKAFN CPIFHCNGDD PLAVSTALET AVEWRHEWGM DVIIEMVCYR
RNGPNKLDQP AFTQPKLYKE ISQHPPTLDI FEK