Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49787 |
Symbol | |
ID | 7198360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011692 |
Strand | - |
Start bp | 290081 |
End bp | 290850 |
Gene Length | 770 bp |
Protein Length | 153 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184596 |
Protein GI | 219128808 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.293303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TCAGCACGAA TTCATCCTGT CACAAAGGGG GTTTGTTGGG ATCAGCTTTT ACTCGCAAGC CGCCGAAGAG ATTTCGGACA ACGAAGAACC CCACGAGCCG TTGTTCTCGG GCAAAGCTGC GAATGAGCAA GCACTCGGTC CGGCACAGTG CATTCTAGAA AAAAAAGATG TTCTCGCTGT CCGGGCATGT TGCCAAGCCC GTCAGCCAGA AGAAGATATC GTAGCGTTTT ACCAATCCTA TTGCACGGAG ACGCCGCCTT TGCCGGGCAA GGGGTAGTCT ACGAGACCAT GCAAATGGCC GAGGTGCCCG ATTTTGATGT TGGTGGAACC ATTCACGTCA TCATCAACAA TCAGATTGGC TTTACCACCA ACCCCCTACA TTCGCTCTCA ATGCCCTACT CGTCGACGTT GGGCAAGGCC TTCAATTGCC CCATCTTTCA CTGCAACGGC GACGATCCCC TGGCAGTATC GACGGCACTC GAGACCGCCG TCGAATGGCG TCACGAATGG GGCATGGATG TCATTATCGA GATGGTCTGC TACCGTCGTA ATGGTCCCAA CAAATTGGAT CAGCCGGCCT TTACACAACC CAAACTCTAT AAGGAAATCT CTCAACACCC ACCAACCCTG GATATTTTCG AAAAGTGATT GATTGAAGAA GGAACCTTAT CCAAAGAAGA TGTTAAGAGA TCCGTGACTT TACGCTGGAA AGCTACGAGA AGGATTTGGA AGCTTCCAAG ATGTATGTGG AAAAGGAGGC GGATTGGTTG
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Protein sequence | MLPSPSARRR YRSVLPILLH GDAAFAGQGV VYETMQMAEV PDFDVGGTIH VIINNQIGFT TNPLHSLSMP YSSTLGKAFN CPIFHCNGDD PLAVSTALET AVEWRHEWGM DVIIEMVCYR RNGPNKLDQP AFTQPKLYKE ISQHPPTLDI FEK
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