| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49762 |
|---|
| Symbol | |
|---|
| ID | 7198444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011692 |
|---|
| Strand | + |
|---|
| Start bp | 198364 |
|---|
| End bp | 200742 |
|---|
| Gene Length | 2379 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184504 |
|---|
| Protein GI | 219128615 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AACGAAGCTG TGAAGCTCGG GATTATCTCA GGTTCCGTGA TCCACTTTTC GCTCGTTGCA
GCAGTTGTGC CTCAACAATC TATGCCTTTA GCTCCAGAGC CTAGAATACA GAACTAAAAA
GCGAAAGGCT CCTTTTTCAT TTGCTGCATT TTGCTTTTCA CCTTTGAACG GAAAAATATT
ATGCCTGATC CGCTGATTCG AATGAACAAC ACGGCGATTG TCCTCATGCA ACGTGGCGCC
AATCTCGAGG CTGTCGATCT ACTTTTATGT GCACTTGACC ACATGAAGAC TTTCCTGGGC
CCTACAGAGA ACCCACTCGC ATCGACAATT TGCGCAGGCG ATGACCTTTT CTCTGGCGGA
ACCGTCGTCG CCGTGATGCT CGGCAATGAT AGCACCGACC CCACTTCGGC AGGAAAATAT
CAGCCTCGCA ATTTGCTTGA GATTGCGAGA TCGGAAGCAA CACATGATAT CGCTGACTTT
TTCTTTGAAT ATGTATTTTT ATTTCATCCT GCTTTCACGG CTCAAAACCG TTCCCCAAAG
ACACAGGGCA TCACAGCGGC TTTTCTTCTC TATAATACGG GTGTGGCATA CCAAAGAAAC
GGTGTTTGCA CTGAAACATC GAAATTTTTT GAAAATGCAC TTATACTCTA TTCAAGGGCG
TCTACACTGA TCGAAGAATT CGACGGAACC TTTGCCAGCA GCCTTTCTCA GGCCCTGTAC
GTGCTTGCTC TAGCCTTGCA TATTAATATC GCAAGCATCC ATTTCAGATT TTTCAATCAA
GTGGAATTGG ACAAGGCTCT TGCTCAGTTC CATTCGAAAT TTTGCCTCAT TAGTCGGAAT
GACATGCAGG ACGAAACGTA CAAATTTTTT GCGACGAGTT CTTGGTTCTA TTCGGTCTTC
ACTTTGCGAC GACCTGCTGC GGCAGCTTGA AACTAAAAGC AATGTAAATA CTCCCAAACA
TTCCTTAGGG TCCAACGGTT TTTCTGATCA CACTAAACTA GGCGGGTTGT TCTGAAACGC
GGAATAGCGG TGTGCGGGCG ACAGTGTTGC AAATTTTTTT CGGACAGAAT GGAACTTTGA
ATAGTGGAAA CCATCACGTC CCCGAGCACC CTATTGGTTA TAGGCCATTG AAAAGAAAGT
GGGGGCTGCA GACTGCGAAT ACTAGAATAG TTGTCAAAGA ATCCGTCTCA GTCCATTCGC
AACACGCCCT CTCAAAACGT CTTCCGAAAG AGGCAAGTCT GTTGTGGTGC GTTTGAGTTT
ACCCAGTCTT CTTGCACTTA CCGTTAAATA CAATAGCGGC AAAGCATAAA AAAATCTACG
AGTCGTAGGT AGGTTATCCT ACGACCTTTC GTCTACTCAC TGCTAAAGAA AATACGGCGC
GCGCAAGCGT TTGCATATGT GGCAAATATG TTGCGAACGT TTTGCAAAAT AGGTCAATGG
AAGGATTTCG AATGACATGA GTGCAACCGT TTTCCAGTTC ATTTTCTTTT CGCTCGAAAT
GGACGAATCT CTAGACGGTC GCCGTCGGAA GCAGGTGGCA TGGGCTCACT TGCGAAACTT
GACTTGCTGT TACATTGACT GAAAGTTATG AAACGAAAGC GGCTGGTGTC ACATTTTGAT
CTCCATGGGA ACGGTAATTT TGGAAAAAGA AAAGTGAAAA ACGTTGGGTC CCACGACGCC
AGTCGCGAAG GCCTTCTACT CACAAGATTC GATCTAGATA CAATCTATGT GCATCGTAAG
GACGGTAAGA GCTGGTCGTT GTGTTTGTTA GATGGGATTA GTGTCGTGTA AATTTAATTT
TTTTAGACTC CATCTGAATT GCAAGCCATG TGAGCTAACC CCTGCACGTG ATCACTCTTC
TTACGTCCAG GCACTTGCAT CAACTCAATT CGTTTGAAGC GCAACTGTGT ATCAGCTTAT
CGCAATATCT CGCTAGTACG CTTTGCCAAA CAGCAAAGCA AAAATTTCGG GATGGAAACG
GACCAGGTGC GATCGATATT TGCTGTTGGT GAGAACCATC CGCTCAATCC TCAATCTCCT
GTTGATTTTG CTTCGTATGA AGGGATTGAA GCTTTTTTGC CGTCCTCCCC CAGTTCTGTA
TTGGAAGTGC AACTAGTCAA AAGCGTTGGC GAGAAGGTTA TCATCGAACC TAATGCAGCC
TCGCTGTTGC AAAAACGGAC ATGTTGTGAG TCGTCGGTAT TTCGTCCAAT TTCCTGCGAC
GAAGGTTCTA TAAAGGAAGA CATTGCTCGT GCCTCGAAGG ATCCTGACGA TCAACGCTTG
ATGTCCTATT CCGACGATGA CAGTGCAGGC GGAGAAAACG AGAACGATCT TCTTGGCCTC
CAATTCCTGA CGGACGAAAA AAAAAAGAGC CAAGCCTAG
|
|---|
| Protein sequence | MPDPLIRMNN TAIVLMQRGA NLEAVDLLLC ALDHMKTFLG PTENPLASTI CAGDDLFSGG
TVVAVMLGND STDPTSAGKY QPRNLLEIAR SEATHDIADF FFEYVFLFHP AFTAQNRSPK
TQGITAAFLL YNTGVAYQRN GVCTETSKFF ENALILYSRA STLIEEFDGT FASSLSQALY
VLALALHINI ASIHFRFFNQ VELDKALAQF HSKFCLISRN DMQDETYKFF ATSSWFYSVF
TLRRPAAAA
|
|---|
| |