Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49741 |
Symbol | |
ID | 7198432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011692 |
Strand | - |
Start bp | 129071 |
End bp | 130390 |
Gene Length | 1320 bp |
Protein Length | 343 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184573 |
Protein GI | 219128759 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAAACA AACTAATCCG AGATTCGACG TTCCCATTTT CTGAATTCTC CACGATGGTG ACGCCGTCGT TGGCCATGGC AGTAATAGCA TTCATTTGCA CCGGAAGCCG TGTCTCTAAA CCTACGCATC TCACCAGACT TTTCAGTACG GTACCGTATA GAGAAAGCAC TCTGATATCG TCCACTAAAT CCAATACAGT CAAGAAGATC CAAGCGCTTT TGAATAAACG GAAAAAACGA CTAGAGCAAC GCGAGACCGT CGTGGAAGGA CCTCGGATGG TTGTCGACCT ACTGAAACAA CCACAAACCC ATCATTTGGT TCGAAGCATC TTTATTGCAT CAGACAAGTG GGAGCAGTAC TATCCTGAAA TCCTCCGGGC TGTCGGTGAA GACGAGAGCC GCCTACCACT CACGCTTCCT GTGACGCCAC CGGTCTTTGC CGCGTGTAGC GACACCATCA CGCCACAGGG AATTCTGGCC ATAACGGAAA TCCCCATTTT TTCATTGGAG AGAAGGGATG CTCCTCAAAA TCCGCTGTAT TTGGTCCTCG ATGGCGTGTC CGATCCGGGG AATCTGGGAA CTCTACTACG CTCAAGTGTG GCGACAGGTG TCGCTGGAGT GTTGCTGCTG CCCGGATCCT GCGATCCATG GGCACCGAAA GCTATTCGAT CCGCCATGGG AACGACTTTT CAAATACCAG TCGAAACTTT TGAAAACTGG GATGAATGCC GGGAAAAACT AGTACATTTG GGTTGCAACA ATTTTTGGGC GGCTACCATG TTGGAAGACG GAGTCGGCAG GTCCCATTAC GAGGTTAACT GGTTGAGTGG GCCAAATGCT TTGATCATTG GAAGTGAAGG AAACGGCCTG ACAAAACCGA TTCGGGATGA CCTAGCTGTC ACATCACCAA GGTTGAAATC TGTCTACGTT CCCATGAAAG CCGGTATTGA GAGCTTGAAT GCAGCCGTGT GTGGGAGTGT TATTCTGTTT GAATACATGC GTCAAGGGGA AACCAACGTA TCCACAAAGT GAATTGTGTG GACCCCAAGA TCTTGTTCTG GAACACCAGG TCAAGCGCAT AACTTCTCTT ACCCACTGAT TCTCGACCCA CCATATATTG GTAAGGCTTG GACAGGAGCG AACTGTCTCT ATGCGTGCAC ACACCCGCAT AAACTTTAAA GCCCTACTTT TATCTAATTT TCAAAGCTCA GGTTGGCCAC CAAAAGGTAT TTGGGAATTG GCACGAGACG ACGAGCATTG GAAGGGGACA TAAAGACACT GATTTGGTCT ACTAGTAGAG ATGGTTTCTA TTCATCCGTG
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Protein sequence | MRNKLIRDST FPFSEFSTMV TPSLAMAVIA FICTGSRVSK PTHLTRLFST VPYRESTLIS STKSNTVKKI QALLNKRKKR LEQRETVVEG PRMVVDLLKQ PQTHHLVRSI FIASDKWEQY YPEILRAVGE DESRLPLTLP VTPPVFAACS DTITPQGILA ITEIPIFSLE RRDAPQNPLY LVLDGVSDPG NLGTLLRSSV ATGVAGVLLL PGSCDPWAPK AIRSAMGTTF QIPVETFENW DECREKLVHL GCNNFWAATM LEDGVGRSHY EVNWLSGPNA LIIGSEGNGL TKPIRDDLAV TSPRLKSVYV PMKAGIESLN AAVCGSVILF EYMRQGETNV STK
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