Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49726 |
Symbol | |
ID | 7198419 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011692 |
Strand | + |
Start bp | 72348 |
End bp | 75157 |
Gene Length | 2810 bp |
Protein Length | 741 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184483 |
Protein GI | 219128572 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.125269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTGTGC ACTACTCTCG TAGTAAAATC AATTCAGTCT ACATTTGACA CAGAGCGCTG GCAACTATTG GTTTGAGTCT ACAGACTGAC GCAAACGAAA ACCGAGATGA GTTTGCAGCC ACGAAGGCAA CGGCGACGAG GATGTCGCCA GATTTCGTTG TTGTGCTTAT ACACGTTGCT GATTGCGATC GGATTGTTGG CCCATTCCGT GCACGGTCAA CGTGCGGCTG TGAACTTGAG CCAGAAGATT CAGAACCGAT TCGCCAAATC CGCAGGACGT GGAAATATCG TTGAAGGTGA GAACAAACCG ACGCGTACAG ACAAAAGTTC CATTGGAAAA ACGTCTCGTT GGTTCCATGT TGCGGGCCTT TGGGAACCGG AGATTCCAGT AAACTCGCCA AACTTGATCG CTACTGTAGT GTTGGCTGCA ATGATTCTGG CTGCTCTGGT CGTCTATTTG CCTCAACCGA CAAAAAAAGA TTTGCGAGTC GGAGTCCGGG ACGGTGAGTC GGTTACATTC GACCTGCCTC CGATACATTT GTGGACCATC GCGTTGCTAC ATCACTTCTT GTACCCCGAA GTGGCATAGG AATTCATTCA TGACATATGC AAAACTACCG CTTACACTGC CTTTGCGTAT AAATCAATAG ATGAACTTAA GATTGAGGGT GGCAATGTGG TAGACACTGA ACCGATTGAT TTGGCCTTTG AAGGATTAAC GTTAGAGTTG GAAACCAAGT CGGGTGAGGT CCGAACCATA CTCGACGGCG TCCGTGGTCG AGCCCAGCCT GGCCGTATGC TGGCAGTCAT GGGACCATCA GGTGCGGGAA AGTCCACGCT GATACACGCC TTAGTTGGGC GAGTCAAAGA CAATACGAAA TTGTCATTGT ACGGTCGCAG GTACATCAAC GGCGAACCCG TGTCTGGGGA TTCACTCTTG CCGGCTGCTT TCATCGAACA AGACGTCAAC TTCTTCCCGC ACATGACGGT CCGTGAAACT CTCCACTTTC GTGTGGAATT GAAACTGGGA AGTTTACTGA GTAAGCATGC TCGAGACAAA ATGGTGGACG GATTGATGGA TCAATTAGGT TTGACGAAAG CTGCCGATAC AGTTGTCGGA GACGCAAAGG TCCGCGGCAT CTCGGGTGGA GAGCGCAAGC GTCTTTCCAT CGCAGTGGAA ATGATCTCAA GTCCTTCCGT TATTGTTCTA GACGAGCCCA CAAGCGGCTT AGATAGCACT GCAGCTACTT CTTTGGTACA GACGCTTCGA GATTTAGCCG ATTCCGGGAA GACAGTGATT GCTGTTATTC ATCAGGTGCG TCTTTGGTTT CTTGCAAATG CCACGCTCAC TCTTTGTTGT CCGATTCATC TCAACTGAAG ATTGCTTGTC GTAATAGCCA AGTCAGCACG TCTTTGCAAA ATTTGATGAT CTGCTACTCG TTTCTGAAGG AAAGCTGATG TACTATGGCG AGCTACATGG GGTAAGATCC TATATGGAAT CTTACGGACA CCCAGCAACC GCAGAAATGG GAACCGCAGG TAAGTCTCTG AATTGATATC TGGACGTAAG GTTTATTCAG TATCGAGCTG ATTCGACTGT TTTGAATGTC ATGCAGAGCA TATTCTAGAT TGCATTTCAC GGCTTCCAAT TGAAGAGGAA ACCAAAGATG AGATGAATTC ACGTATGGAG CGACTTATTT ACAAAGCAAA CTCGAACCCA TTGGATTTAG GTAAGATGGC AACAGACGAC AACGGGACGA CAGAGTTTAC CATGGTTTCC CGCGGTGGCC CGAAAGCTGG CATAATTACT CAATTTCGAA CACTTTTCAA ACGCTCCTTT CGAGAGGTAA TTCGTGGCAA AACAACGCTC ATCTTAAAGA CTGTCCAACA AATCTCGCTA GGAGTCATTT ACGGCGGAAT CTATTCGCTG GGCACAAACC AGGCCTCGAT ACAGGATCGC TTTGGTCTGC TTTCCTTGAT TGCCATTGGA TCAGCGAACA TGGCTGTTGC GTCTACAATT CGATCCTTTC CTCGGGAAAA GGCTATAGTT TCGAACGAAA TCGCTTCAAA GATGTACCGC ACTCTTCCAT ACTTCATTGG TAAAGCACTT TCGGAGCTGC CATTAGTGGC TGTTTTTAAC GGTATTTTTG GAACCATCGT GTACCATTTG ACGGGTCTCA GTCGTATGAA AGGAAAATTC CGACGTTTTC TCGGCTTATT GACTACGCAC GGTTTGGCAT CCGAAGCAGT GGGTCTTGTT ATCGGGGCCG TCAGTCCGAG TTCCGATGTT GCATTGGCTA TCTTTCCTGC TGTTCTTGTA TTGAACATTA TCTTTGATGG CAAGAACATC TCCGAAGAGA ACACACCGAG ATTGCTGAGA TGGATTCCTA AGATCGGCTT GATTCGATGG GGGTTTGAAG GGCTATGTGT CAATGAATTC GACCAATTGA CTTTTGATAC GAAAGGACCA CGTCGAGGAC CAGTCGCCAA GTTTGGGTCG GAAGCGTTGG ATCGTTTTGG TTTGGGGACG AATACACTCG GCGATATCGT GAAAGCACAA CTCTCCATCA CGGTTGTTTC CTGGGCTCTT AGCTACATTG GTTTAACGTT GACGGGTCAA AAATATCTCA AGATGCAATC ATTTAAAAGC GATTCGGATT GACTGTGAAA GGAAAAAAGA GTCTAAAAAT TTGAAAGGTA GGAGGTTTAC GTAAATGAAG GCTTTTGATT GCGTGAATGA TACTCTGTTG TACTGAGACA CCCAAATATT CGGGAGAACA TAAATACTGT CAGTGACGAT TCTTTTTATT
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Protein sequence | MSLQPRRQRR RGCRQISLLC LYTLLIAIGL LAHSVHGQRA AVNLSQKIQN RFAKSAGRGN IVEDKSSIGK TSRWFHVAGL WEPEIPVNSP NLIATVVLAA MILAALVVYL PQPTKKDLRV GVRDDELKIE GGNVVDTEPI DLAFEGLTLE LETKSGEVRT ILDGVRGRAQ PGRMLAVMGP SGAGKSTLIH ALVGRVKDNT KLSLYGRRYI NGEPVSGDSL LPAAFIEQDV NFFPHMTVRE TLHFRVELKL GSLLSKHARD KMVDGLMDQL GLTKAADTVV GDAKVRGISG GERKRLSIAV EMISSPSVIV LDEPTSGLDS TAATSLVQTL RDLADSGKTV IAVIHQPSQH VFAKFDDLLL VSEGKLMYYG ELHGVRSYME SYGHPATAEM GTAEHILDCI SRLPIEEETK DEMNSRMERL IYKANSNPLD LGKMATDDNG TTEFTMVSRG GPKAGIITQF RTLFKRSFRE VIRGKTTLIL KTVQQISLGV IYGGIYSLGT NQASIQDRFG LLSLIAIGSA NMAVASTIRS FPREKAIVSN EIASKMYRTL PYFIGKALSE LPLVAVFNGI FGTIVYHLTG LSRMKGKFRR FLGLLTTHGL ASEAVGLVIG AVSPSSDVAL AIFPAVLVLN IIFDGKNISE ENTPRLLRWI PKIGLIRWGF EGLCVNEFDQ LTFDTKGPRR GPVAKFGSEA LDRFGLGTNT LGDIVKAQLS ITVVSWALSY IGLTLTGQKY LKMQSFKSDS D
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