Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49719 |
Symbol | |
ID | 7198414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011692 |
Strand | + |
Start bp | 50392 |
End bp | 51353 |
Gene Length | 962 bp |
Protein Length | 176 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184478 |
Protein GI | 219128561 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00775577 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TGCGATTTCG ATTTCCTCGA GTAGTTGTGG GTATCGCGCT GCTTTCCTCA CTATCGTAGA CGGGAACGAA GATAAGAACG AGCCGTCTGG AAATCACTGT GAGTACGTCC TATACATACG CTACTCGTGC TGTGTTGACT GAGAGACTCT CCCTCGTGTT TCTTGCGTAT CACAAACATT GATTCTTTCT TGAATTGGAA TTGTCGCTCC CATCCTTTGT CGCCTCGTCG AAGTACCGTT GCAAAACACA GTCATGGTGT GTGCTGCCAA GAAACTAGCC GCCGCGCACG CTGCCATGCC TCAGGATCCC AAACACACCA TGCCGGGCGA TGTCACAAAG TTAGGCTTGC CTCCGTCCGC CGAAACCAGC GAGACGAACG GGAACACCAT CAAAGGCCGC AACGTTTCCG GACGAGCCTG GAAGGTTCGA CCGCAGAAAC GCGCGAGCAC CTTGGTCAAG ACCAAAACTA ACAATCTGGT CAAGTCGTGG GAATCACGAC AGACCGAAAA ACTCGCTCGT AAAGAAGCCC TCGAGCTGCA GAAGCATTTG CAAGACGAAC GACGGGACGC TGCAGTTGCC AAGAAGGAAC GCCGGCTGGA AAACGAAAAG AGAAGAGCAG AAAACGAATA CCGGAACATG CAGAAATCGC TGCAAACTCT CAATCATGCG AAACTTGGAT CGACTCTCAA GGCCATGTCC AAGAAACAAC TGCGACAGGT CAAGAAGACG CGTCTTAACA CAAAGACGGG AGTCGTCGAG TTGGTTCCGG CGTACGCCAA GTAACTAGAA TTAGTTGCCG GTGGCGTTAC AGCAATCTTT TTTGGAAAAA CAGTTAATTT GGGAACATCT ACTATATATA TCATACAAAT GCTGGCAGGA AAATTTCGTT CTCCCGTACG CTATATCGTA TACTAGGTCG GAGGGGTTAA TACCTAGAAT AAAGTAATAC AATTACAAAG GG
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Protein sequence | MVCAAKKLAA AHAAMPQDPK HTMPGDVTKL GLPPSAETSE TNGNTIKGRN VSGRAWKVRP QKRASTLVKT KTNNLVKSWE SRQTEKLARK EALELQKHLQ DERRDAAVAK KERRLENEKR RAENEYRNMQ KSLQTLNHAK LGSTLKAMSK KQLRQVKKTR LNTKTGVVEL VPAYAK
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