Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_40624 |
Symbol | |
ID | 7198484 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011692 |
Strand | - |
Start bp | 481166 |
End bp | 482030 |
Gene Length | 865 bp |
Protein Length | 266 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184625 |
Protein GI | 219128868 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGCAA GCACTGGACA AATGACCAGC AGCACTGTCT TCTCGCATTT TTTGGATAAT GTTTTCTCAA TTCCCCAAGG GCATCCAATT CGGCTTAGCT TTGCTCAGCA AGGGTATGAT ACCGTGGAAG ACCTTCTCGG TATTTGTGAG AATGAACTTG GTACCTTTGG GTATGTTCCT CCAACAAGCT TGGACACCAA TGACAACCCC CAGTGGACCC CATTGCTCAT GGCACACCGA CAGATCCTTC GCCATTTTCT ACGTTGGCAG GCCTCACTTG AACGGAAAAA GGGAAGTTCT TTAGACAATT CTGAGCTCGT TGAGTTGACC AGTAGTGACT TTGCCTTCTA TAAACGGTCG GCACTTGGCC AAGTTTCAAG CGTATTGACC ACTGCAACAT CTTCTTCGAG CGCCCCGGGC ATACCTAACA AACCTCGGTC GGTTTTTTAC GGACAGAAGA AACCTGTTTA TTGTAAAGAA GATGCAACTA CCCTGTCTGT CAACAACACC AATGCAATCA CGTACTGTTC GAGTGTACAT TCTGCATTGA GATCCGGAGC AACCAACCTT GACCTTATGC CACAGGATGG GGAGAGTATT CCTAAACCCA TCAGCTTTGT CAAGCCCCTT GGAACTGAAA CCCACAATTC CTGTGCCTTT AAGGGTTTAC CTGGTTTCAC TCCTGACAAC CTCATTGGAA AAACTTTTCT AACCGACAGT CAGGATGATG GGGAGCTATT TCGTGAACGG CAAACTTTCC CAACTGATAC TCAGGATGAT GGGGAGCAAC TGTGTGAATG CAATACAGGA AAATTTCTGG AATGTGATAA ACCATCTGAT GAAAAAATTT TGGAGGGACT TGTAA
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Protein sequence | MLASTGQMTS STVFSHFLDN VFSIPQGHPI RLSFAQQGYD TVEDLLGICE NELGTFGYVP PTSLDTNDNP QWTPLLMAHR QILRHFLRWQ ASLERKKGSS LDNSELVELT SSDFAFYKRS ALGQVSSVLT TATSSSSAPG IPNKPRSVFY GQKKPVYCKE DATTLSVNNT NAITYCSSVH SALRSGATNL DLMPQDGESI PKPISFVKPL GTETHNSCAF KGLPGFTPDN LIGKTFLTDS QDDGELFRER QTFPTDTQDD GEQLDL
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