Gene PHATRDRAFT_40610 details

Gene Information

• Locus tag: PHATRDRAFT_40610
• ID: 7198385
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011692
• Strand: +
• Start bp: 445112
• End bp: 445684
• Gene Length: 573 bp
• Protein Length: 190 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002184544
• Protein GI: 219128699

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00359533
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCACCTG TTCCTAGCAA GACGGTCCTC ATGCACATTC TGGACAATGT GTTTGTGCTC 
TCCGAAGATC ACCCAATCCG TTTATGTTTT TCGCAGCAGA GCATTGAATC TATGGAGGAT 
TTTTTCAGTT TTCTTGAAGA TGGCATTGAT GCCCTCACTT TTTCACCCAC ACCTGCTGAC 
GAAAGCAACT TACTTCCACG ACGGATGCCC ATGAAGCTTG GACACTGTTG GCTTCTGCAG 
GCTTTCTTTG ACTGGCAAGT ATTGCTTGAA TGGGAAAAGG GGAGTTTTTT GGAGAATTCG 
GAACTTGCTG CATTGACCAA AGCGGATTTT ACTTGTTACC GACAATCTGC AATCAAGAAA 
GCCTCAGCTG CATCCCTTAT GCCATCAGCT TCTACCCTTG GTGTCACCAG GAAGGGCCTT 
ACACCACAGG ATGGGGAGGA TTGTTCTAAG CCCATCAACT TTGCCAAGTT GCATAGAATC 
AAAAGCAAAA ATTCCTGTGT CTTAAAGGGT TTACCTGATT CCACTCCTGA CAATCTGATT 
GGAGAAACTT TGCCAACCAA TAGTCAGGAC TAG 

 

Protein sequence

MPPVPSKTVL MHILDNVFVL SEDHPIRLCF SQQSIESMED FFSFLEDGID ALTFSPTPAD 
ESNLLPRRMP MKLGHCWLLQ AFFDWQVLLE WEKGSFLENS ELAALTKADF TCYRQSAIKK 
ASAASLMPSA STLGVTRKGL TPQDGEDCSK PINFAKLHRI KSKNSCVLKG LPDSTPDNLI 
GETLPTNSQD