Gene PHATRDRAFT_4048 details

Gene Information

• Locus tag: PHATRDRAFT_4048
• ID: 7198471
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011692
• Strand: +
• Start bp: 393977
• End bp: 394663
• Gene Length: 687 bp
• Protein Length: 229 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002184536
• Protein GI: 219128682

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.413268
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATACTAGCCC CCATGGTGGG AGCCAGTGAA CTTGCGTTTC GATTACTTTG TCGCAAATAC 
GGAGCTCAAG TTGCCTACAC ACCCATGATG AGTGCACCCA AATTCGCGAC GGATCCATCC 
TACCGATCGG CGGAATTTCA AACTTGTGCG GCCGATCGAC CCCTCGTGTG CCACTTTGCC 
GCCAACGACG CTGCGGATTT CGCGGCCGCT GCCATTGCCG CCCAGCCCTT TTGTGACGCA 
ATCGACTTAA ATCTGGGCTG TCCCCAACGA ACGGCCTATT TGGGGCACTT CGGTTCGTAT 
TTGCTCGATC GCAAAGATCG CAGTTTGATA TGCGACATTG TCCGAGCGGG AGCAGCGGCC 
GTGTCGATTC CTATTTTTGT CAAAATTCGT CTCCTGGATA AAGTGGAAGA AACGATCGAA 
CTTTGCCAGC AACTAGAGCG GGCGGGTGCC TCGCTCATTG CCGTTCACGC TCGGTACCGA 
GCGAGTTGGG AGCGGAAAGG AGCTGGCGCG AGAGATGGGC CCGCGTTGCT GGATCAAATC 
GCCGTTCTAA AACAGCACAT CACGTCTATA CCCATTATTG CCAACGGAAA CGTCATCACT 
TACGACGACG TCGAAAAAAA TCTTGAGTTG ACCGGAGCGG ACGGAGTGAT GAGTGCGGAA 
GGTATTCTAG ACAATCCGGC TCTGTTT 

 

Protein sequence

ILAPMVGASE LAFRLLCRKY GAQVAYTPMM SAPKFATDPS YRSAEFQTCA ADRPLVCHFA 
ANDAADFAAA AIAAQPFCDA IDLNLGCPQR TAYLGHFGSY LLDRKDRSLI CDIVRAGAAA 
VSIPIFVKIR LLDKVEETIE LCQQLERAGA SLIAVHARYR ASWERKGAGA RDGPALLDQI 
AVLKQHITSI PIIANGNVIT YDDVEKNLEL TGADGVMSAE GILDNPALF