Gene PHATRDRAFT_30643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_30643 
SymbolLhcf7 
ID7198473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011692 
Strand+ 
Start bp407147 
End bp407909 
Gene Length763 bp 
Protein Length204 aa 
Translation table 
GC content52% 
IMG OID 
Productprotein fucoxanthin chlorophyll a/c protein 
Protein accessionXP_002184540 
Protein GI219128691 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.159415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGAATTCTTC GTCTAGGACT GTATCACACC CAAAGTTTAC CGTTTTCACC ATGATGAAGC 
TTGCTCTCCT AGCCTCTATT GCTGCTGGCG CCGCCGCATT TGCTCCGTCT CAGGGTCAGT 
CTGCCCGCGC TTCGGTTGCC ACGAACATGG CCTTCGAAAA CGAAGCCGGT GTCACCGCTC 
CTCTGGGTTT TTACGATCCC CTCGGATTGG TTTCGGACGG CGACGAGGCT AAGTTCAAGC 
GTCTCCGTTT TGTAGAACTC AAGCACGGAC GCATTTCAAT GCTTGCTGTT GTAGGGTACA 
TTGCCACCGC GACCGGAAAC CGTCTGCCGG GAACCATTGA TTTCGCTGGT ACCAAGTTCT 
CCGACATTCC GGCCGGATTC GGTTCTTTGG CCAACATCCC CGCCGCTGGC CTCTGCCAGA 
TTCTCTTCTT CATTGGACTT TTGGAGACTT CCTTCATGCG TGACTGGGTT GGTGGAGAGT 
CGGTGGGTGA CTTCCGCAAC AAGTACATCG ACTTTGGCTG GGACTCCTTC TCGGATGAAG 
AAAAGGCACG TCAGTACAAT GTTGAGCTTA ATCAGGGCCG TGCTGCACAG ATGGGAATTC 
TTGCCCTCAT GGTGCATGAG CAACTCGGCA ACGTGGACGA TATCTTACCG TTCAAGCTTA 
TCTAAAGTTG CTACCACGAG TAGTTTGTAA AAGTGGTTAG AACTCCTATA ACCATTCCGA 
CACTCGTGCT TTTATAGATA AGAGTAGGCA TTTGTAGAAG ATC
 
Protein sequence
MMKLALLASI AAGAAAFAPS QGQSARASVA TNMAFENEAG VTAPLGFYDP LGLVSDGDEA 
KFKRLRFVEL KHGRISMLAV VGYIATATGN RLPGTIDFAG TKFSDIPAGF GSLANIPAAG 
LCQILFFIGL LETSFMRDWV GGESVGDFRN KYIDFGWDSF SDEEKARQYN VELNQGRAAQ 
MGILALMVHE QLGNVDDILP FKLI