Gene PHATRDRAFT_30638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_30638 
Symbol 
ID7198467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011692 
Strand
Start bp375577 
End bp376525 
Gene Length949 bp 
Protein Length294 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184533 
Protein GI219128676 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.401359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GGCAGCAAGG AACTAAATTC ATTGACAACA AACTACGAAC CCAAGCCATT CGTGGCACGC 
GACAGAAATG AGACAGCACT CCTGTATTTT AATCGTTACA AAAGCGGCAA AGACAACACA
AGTGCTATTC CGCTTCCTTT GTCTTTGCTT CATGACGAAC ATGTCGTTGG CTAGCCACAC
GTCCAATCAT GCCGTCATTG TGGGTTCATC ACGCTACTGG TTTAATTATC GCCACGAAGT
CAATGCGTTG TCGATCTACA CTCTCTTAAA AGACAACGGA TTTCGCGACG AGAACATTGT
CCTTATGCTC GCGGACGAAT ATGCTATTAA CCCACGCAAC GTTTTGAAAA ACGTGATGTA
CCCTGGAAAT CGTAAACGAT CCTTGTACGA TAAGACCACA GAAATAGACT ACCGCGGTGA
GGATGTAACC GTACAAAACT TGGTCTTGGC TTTGACAGGA CGGCAACGCA AAGGACTCGC
CCAGCTACAG TCGGATCGCG ATAGTCACAT TTTGATCTAC TTGACGGGAC ACGGTGGAGA
TCAATTTTTC AAATTCCAAG ATGTGGAAGA ACTGCTGGCA ACGGAAATTG CCTCGACGCT
GGATCAGATG CATCGAGACG GATTGTACGG GCAGGTCCTT TTGGTGGCCG ACACGTGTCA
AGCGTTTACG CTCGGTGACA AAATAACGGC TCCCAATGTC ACCGTGATTG GGAGTTCACT
CCGGGACGAG TCGTCGTACG CACATCACTC TGACATGGAA ATTGGGCTTG CTTCAATTGA
GCGATACACG CACACTTTTA TGGAGTACGT ACGGGCCAAC GGGACATCGC ATAGCCTTCA
ACAGTCCATG GTGGACGCGT ATCCATTTTT AGTACAGCGG GCCCACATCG GGGCTAGGGA
TGATCTGTCT CCGCGCAAAC TTTCGCAAGT ACCGCTGTCG GATTTTTTT
 
Protein sequence
MRQHSCILIV TKAAKTTQVL FRFLCLCFMT NMSLASHTSN HAVIVGSSRY WFNYRHEVNA 
LSIYTLLKDN GFRDENIVLM LADEYAINPR NVLKNVMYPG NRKRSLYDKT TEIDYRGEDV
TVQNLVLALT GRQRKGLAQL QSDRDSHILI YLTGHGGDQF FKFQDVEELL ATEIASTLDQ
MHRDGLYGQV LLVADTCQAF TLGDKITAPN VTVIGSSLRD ESSYAHHSDM EIGLASIERY
THTFMEYVRA NGTSHSLQQS MVDAYPFLVQ RAHIGARDDL SPRKLSQVPL SDFF