Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_30638 |
Symbol | |
ID | 7198467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011692 |
Strand | + |
Start bp | 375577 |
End bp | 376525 |
Gene Length | 949 bp |
Protein Length | 294 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184533 |
Protein GI | 219128676 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.401359 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GGCAGCAAGG AACTAAATTC ATTGACAACA AACTACGAAC CCAAGCCATT CGTGGCACGC GACAGAAATG AGACAGCACT CCTGTATTTT AATCGTTACA AAAGCGGCAA AGACAACACA AGTGCTATTC CGCTTCCTTT GTCTTTGCTT CATGACGAAC ATGTCGTTGG CTAGCCACAC GTCCAATCAT GCCGTCATTG TGGGTTCATC ACGCTACTGG TTTAATTATC GCCACGAAGT CAATGCGTTG TCGATCTACA CTCTCTTAAA AGACAACGGA TTTCGCGACG AGAACATTGT CCTTATGCTC GCGGACGAAT ATGCTATTAA CCCACGCAAC GTTTTGAAAA ACGTGATGTA CCCTGGAAAT CGTAAACGAT CCTTGTACGA TAAGACCACA GAAATAGACT ACCGCGGTGA GGATGTAACC GTACAAAACT TGGTCTTGGC TTTGACAGGA CGGCAACGCA AAGGACTCGC CCAGCTACAG TCGGATCGCG ATAGTCACAT TTTGATCTAC TTGACGGGAC ACGGTGGAGA TCAATTTTTC AAATTCCAAG ATGTGGAAGA ACTGCTGGCA ACGGAAATTG CCTCGACGCT GGATCAGATG CATCGAGACG GATTGTACGG GCAGGTCCTT TTGGTGGCCG ACACGTGTCA AGCGTTTACG CTCGGTGACA AAATAACGGC TCCCAATGTC ACCGTGATTG GGAGTTCACT CCGGGACGAG TCGTCGTACG CACATCACTC TGACATGGAA ATTGGGCTTG CTTCAATTGA GCGATACACG CACACTTTTA TGGAGTACGT ACGGGCCAAC GGGACATCGC ATAGCCTTCA ACAGTCCATG GTGGACGCGT ATCCATTTTT AGTACAGCGG GCCCACATCG GGGCTAGGGA TGATCTGTCT CCGCGCAAAC TTTCGCAAGT ACCGCTGTCG GATTTTTTT
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Protein sequence | MRQHSCILIV TKAAKTTQVL FRFLCLCFMT NMSLASHTSN HAVIVGSSRY WFNYRHEVNA LSIYTLLKDN GFRDENIVLM LADEYAINPR NVLKNVMYPG NRKRSLYDKT TEIDYRGEDV TVQNLVLALT GRQRKGLAQL QSDRDSHILI YLTGHGGDQF FKFQDVEELL ATEIASTLDQ MHRDGLYGQV LLVADTCQAF TLGDKITAPN VTVIGSSLRD ESSYAHHSDM EIGLASIERY THTFMEYVRA NGTSHSLQQS MVDAYPFLVQ RAHIGARDDL SPRKLSQVPL SDFF
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