Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_23489 |
Symbol | |
ID | 7198362 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011692 |
Strand | - |
Start bp | 294211 |
End bp | 294916 |
Gene Length | 706 bp |
Protein Length | 125 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184597 |
Protein GI | 219128810 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00699438 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TGCAGGTTGA TGTAATACCT CTCTATTTAG GGAGGATACA CATCACGATA AGGATCGTTT GGAACAAACT GTGGAATGCT AGAAATCGCT ACATTATCTT ACCTCCAAAG TAGCCACCAC GATACACTCT AGCACCCTCG AGATCGTCAT AAGTGGACCC CAAAATGCCG CTTACAAAGG TACGATGCCG TTCAAGCAAG TGAAGGCATA CTACTTCTGT CAGATATCGT TGTTCGTCGA GATCGCCTTA AAAGTAAAAA AAAACTCACG GTCAGCGCAT ATTGGGTCGT GGGTTCGTTT TAGGATATTT TACGAGAAGG GGATGGGCAA ACCTTTCCCC AGAAGGGCGA TATGCTCACT ATGCACTACA AAGGAACATT GGCTTCGAAC AATAGTAAGT TTGACAGTAG CTACGACCGC AAAACTCCAT TCCAATTCAA AATTGGACGA GGAGACGTCA TTCAAGGCTG GGACGAAGGG GTGCCGCAAA TGAGCTTGGG GGAAAAGGCA ATCCTCCATA TTCCATCCGA CTTGGGATAC GGGGCTCAAG GCGCTGGTGG AGTTATCCCT CCCAACGCCG ATTTGGATTT TGAGGTGGAG TTATTGGGTA TTGGGGACAA GAAAGCTAAC GTGCCCTCAG AGTCATCGTG CTGTGCCATC CTTTAAATTT GATCCGGATA AATTTAATTA CTGATGTCTT TCATTC
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Protein sequence | MPLTKDILRE GDGQTFPQKG DMLTMHYKGT LASNNSKFDS SYDRKTPFQF KIGRGDVIQG WDEGVPQMSL GEKAILHIPS DLGYGAQGAG GVIPPNADLD FEVELLGIGD KKANVPSESS CCAIL
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