| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_23472 |
|---|
| Symbol | |
|---|
| ID | 7198451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011692 |
|---|
| Strand | - |
|---|
| Start bp | 253655 |
|---|
| End bp | 255459 |
|---|
| Gene Length | 1805 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184592 |
|---|
| Protein GI | 219128799 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CATCCTTCGG AGTAACTAAA GTAGGGTCTA TCTCTCATTG TGTTCTGTAT AGACTAGGAG
TTTTACGAAC CGAGATAAAA TCCAAGATTT GGGCGCTTGT TCCTCGGCGA CAGTTGGCCA
CGGGCATCCG CTGCGTCGGT AAAGAGTCAC GTAGTACCTA CCAGAGTGGA ACTAAGCGTT
TCTCCATACG TTTGCATTCC ACAATGACCG ACGCCGTCAA TTACAAAACG ATTATAGAAG
GATCCACGAC CATGTATTTT CCGGCCGATC AAGAATCCAC AGTTTTCTAC AACCCCGTTC
AGGTTCAAAA TCGAGATCTT TCAATTCTTA TGATTTCCCT CGCTGCCGAA CGACGGGCCG
TTCGACAGGT TGTCAAAGCA CAACGCAAAG CGTTTCGTAG CGAGGGAGTT TCTAATAAGG
GATTGTCAAC GAAAATGGAG GAGTATGAGG CAAGCTTGGA TTCTGCCCGA GTCTTGTCAG
AACAGGATCC AGCTTTGGGT TTGACGATTC TGGACGCTTT GGCAGCGTCC GGGCTGCGGT
CGATTCGTTA CTGGAAAGAG ATCCCTGGAA CAAAGCACGT GACAATCAAC GATCTGGACG
CTGCCGCTGT TGAACGAGCG TGGACCAACC TGAAGCACAA CAACGTCATG GACGTAGTCT
TAGAACAAAA CGATACTCGT GATCGTGGTA TTCATGTTCA AAATGGCGAC GCGACCCACG
AGCTCTACTT GAGCCGTCGG CCCCAACTAC TCCATGTTGA CGAAAGTCGA CCACCTTCTC
TCAAGCCTCG CTGGGACGTC ATTGATTTGG ATCCCTACGG ATCGGCGGCT CCATTTTTGG
ACGCGGCCGT CCAAGGTATC GAAGATGGCG GTTTCTTGTG CGTTACTTGT ACAGACATGG
CGGCTTTGGG AGGGTCTCAT CCCGAAACTT GCTTTGGTCG ATACGCATCC ATGCCTATTC
CGCGCGCGGG TTATTTGCAA GAAATGGCGT TGCGTATTTT GTTGCATTCG CTGGCGACAA
CCGCGGCCAA GTACGGACGA ACTATCAAAC CGATCCTGTC CGTCGGTATG AATTTCTACA
TTCGTGTATT CGTGGAAGTG TACGATGACA AGGCGGGGGT GAATGCTTTA TCTCTAAAAC
TTGGTAGAGT CTTTCAGTCA ACTCAGTGCG CTTCCTTTCA TATCAAACCT GTAGGTCAAC
TGGGTGGCAA AAATGGCAAT GGATATCAGC CAGGGCGCGT TCCTGACTTT GGGCAATCCG
TCGAAATTGA TGAAAGCATC AAAGTCGGTG GGCCTATTTG GCTGGGGCCG CTCCACGACA
AGACAGTGGT GAAGGTTGCT TTAGATCGAC TGGAGTCCAA GGACGAGACG GTCCTGCCAT
CAATGAAGTG GATTGCAACG AAGGATCGGC TACGCGGCTT ATTGACATCA TGTCATGAAG
AACTCTCCGA TGTTCCCCTC TTTTACAATC TTCCCCAAAT GGCACAGACG CTCAATGCGA
CCACGCCTCC GTTAATCAAA GTTAAGGCTG CTCTCCTGAA TGCGGGCTTT CGCGTCTCTG
GGTACCACAA AGAACCGCAA GCGATCAAGA CAAATGCCCC AAATCAAGTT TTATGGGATG
TTCTCCGAGT ATGGTGCAAA GAAAATCCCC CCAACAGCAC AAAAAACCAT GAATGTAGCG
TTGCCCACAA AATATTGACC AAGACGCCAA CGACTCACGT GGACTTTTCA GTGCCCATGG
CTTTGCGCGT GGACCGTGGA ATAGCTCGAT TCCCACAGAA TCCTGAGCCA CATTGGGGAC
CAAAA
|
|---|
| Protein sequence | MTDAVNYKTI IEGSTTMYFP ADQESTVFYN PVQVQNRDLS ILMISLAAER RAVRQVVKAQ
RKAFRSEGVS NKGLSTKMEE YEASLDSARV LSEQDPALGL TILDALAASG LRSIRYWKEI
PGTKHVTIND LDAAAVERAW TNLKHNNVMD VVLEQNDTRD RGIHPRWDVI DLDPYGSAAP
FLDAAVQGIE DGGFLCVTCT DMAALGGSHP ETCFGRYASM PIPRAGYLQE MALRILLHSL
ATTAAKYGRT IKPILSVGMN FYIRVFVEVY DDKAGVNALS LKLGRVFQST QCASFHIKPV
GQLGGKNGNG YQPGRVPDFG QSVEIDESIK VGGPIWLGPL HDKTVVKVAL DRLESKDETV
LPSMKWIATK DRLRGLLTSC HEELSDVPLF YNLPQMAQTL NATTPPLIKV KAALLNAGFR
VSGYHKEPQA IKTNAPNQVL WDVLRVWCKE NPPNSTKNHE CSVAHKILTK TPTTHVDFSV
PMALRVDRGI ARFPQNPEPH WGPK
|
|---|
| |