| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_1971 |
|---|
| Symbol | |
|---|
| ID | 7198358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011692 |
|---|
| Strand | + |
|---|
| Start bp | 282391 |
|---|
| End bp | 284055 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184517 |
|---|
| Protein GI | 219128642 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CAACTCGAGT CGGAACAGCA ACAAGCTAGC GTTCAGGACG AGTGGATGGA TCTAGCGGAG
CGCATTGACA GCATCCAGGG GAACGATGTA TGGCGGTCCG ACCCGAGCTG CCCCTTGTAC
GAACAGGAAC GTATTTCGGC GCGGATTGAC GAATTGGTGC ACCTTATGCG ACGCCGGGAT
ATCTTTGAAC TCATGTTTGT GCTGCGTGCT TCGATTGGAC GCAACAAGTT TGGGCTGTTG
CACGAAGGGC TGTTCAGCAA GGCGTTAGCG GGTACCAAAG TACTCGTCGA GACGTATCAC
AACGTGGTCT GTGCTGCCTT GGACTTTTGT TGCGACGCTC CCGTGTCTCC TGACGAGGAT
CCTATCCCTA CGGATGCCCG TCTCGCATTT TTCAACGAAA CTCGACACGC TTACGGACGT
ACAGCCTTGC TCCTATCCGG TGGTGCGGCC TTGGGCTTTT ACCATACTGG TGTCGTCAAG
ACGCTTATGG AAAATCGCCT CATGCCGCGT GTAATTGGTG GCAGCTCGGC TGGTTCGCTC
GTGTGTGCCA TGATAGCTAC ACGGACAGAC GAAGAATGCG TGCACGACAT GTTCAACGCC
CAAGGTACCG ACGCTCCGGG ACATTCCGGC CAACTCCCAC TCAACTTTTT CCGCCCCCTC
CAAACGGGGA ATATCAACGC AGCCAAGGTA GACGCAACGC CGAACAAACA ACTCGGGGGA
ATTCGTGAAG TGTACTACAA TACTGCTGGA TTCTTTCACG ATGCCAAGCG GACCTTGCAA
GGGTTGGTTC CAATTCCTCT CCGACACTTT TCCGCCGTGT TGTACGATAT CGTCACCGGC
AACCGTCGGC CTCAAGACAT GCTCATGAAT GATACAGAAC ACTTCCGAGC TTGCGTACGG
GCCTGTGTCG GTAACTTCAC ATTTCAAGAA GCTTTCGACC GGACTGGGCG TATTCTGAAC
ATCGTGGTGA CGCCCAAGAA CAATTCCGAT CCGCCCCGCT TACTCAACTA CTTGACGGCA
CCGCACGTTA TGGTATGGTC AGCTGCCGTC GCGAGCTCCT CCCTACCCGG AGTTTTTGAA
GCTAATCGAC TAGTTGTCAA GGAAGCAGAC GGTTGGGAAC GGTACGAGTC GGGCGGCGCG
CCACAGCACT TTTCGGATGG ATCGATGGAA CAGGATTTGC CCATGCAGCA GCTATCGGAG
ATGTTCAACG TCAACCACTT TTTGATCTCG CAGGCCAACC CACACGCCGT CATGTTTGCC
AATTATCAAC AAAAGAATTC GGTGTGGAGT AATCCTGTTA CGGGCTTTGT GGATTCTATT
CTGACCTTTT TACGCGATCA AGTGCGCACT TGGTTGTTGC ATCTCGTGGC GTGCGTTGGC
GCTCGTAGTA TTACACCTAT GTTCCAGACT CAACGTGGAA TTGGTACAAC TTTCCTGACG
CAAGAATACG AAGGGCGGTC TTGCGACATT TCACTCATCC CATGGTTGGG TCATCGGGGA
CTCTTCAGTG CCTTATTGCA CATTATCTAC AACCCAAGGG AAGCCGAGTT TCGCGAATGG
ATCCAAGCAG CTGAACGAGA AACCTGGCGA CACATTCCGG CCATCAAATC GCACATCGCC
GAAGAAGTTA CTCTGGATCG TTGTGTACAA AGGCTACGAA AAAGA
|
|---|
| Protein sequence | QLESEQQQAS VQDEWMDLAE RIDSIQGNDV WRSDPSCPLY EQERISARID ELVHLMRRRD
IFELMFVLRA SIGRNKFGLL HEGLFSKALA GTKVLVETYH NVVCAALDFC CDAPVSPDED
PIPTDARLAF FNETRHAYGR TALLLSGGAA LGFYHTGVVK TLMENRLMPR VIGGSSAGSL
VCAMIATRTD EECRTLQGLV PIPLRHFSAV LYDIVTGNRR PQDMLMNDTE HFRACVRACV
GNFTFQEAFD RTGRILNIVV TPKNNSDPPR LLNYLTAPHV MVWSAAVASS SLPGVFEANR
LVVKEADGWE RYESGGAPQH FSDGSMEQDL PMQQLSEMFN VNHFLISQAN PHAVMFANYQ
QKNSVWSNPV TGFVDSILTF LRDQVRTWLL HLVACVGARS ITPMFQTQRG IGTTFLTQEY
EGRSCDISLI PWLGHRGLFS ALLHIIYNPR EAEFREWIQA AERETWRHIP AIKSHIAEEV
TLDRCVQRLR KR
|
|---|
| |