Gene PHATRDRAFT_5608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_5608 
Symbol 
ID7198320 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011691 
Strand
Start bp431134 
End bp431923 
Gene Length790 bp 
Protein Length161 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184462 
Protein GI219128525 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGCGCTTCGG AAAATCTGCC ACCCCGTACG CTGGCGAGAG TTGCTCGCGA AGTGCGGGAT 
CTGCATAAGA ATCCACCAGA AGGTGTCCGA CTGGTAGTAG ATTCAGATAC CGGCGTTCCC
AGCAATCTTT CCGAACTCAT GGTACGTCCA AAAATCGCCC TAAAACGTTC GATCGCAAAA
GCGCTCCGTT CGGTCCCATC ATGGTAACCC CCCTCCTGTG AATTCCGTAC CGCCGGGTGC
GACACTCGAC TTCGTGTCAA CTTTACGCGG TCGGGTCCGT TTTAACGGGT ATGCTACTTT
TCTAGCTATT TAAGATTTGA AATGAGAACG CGACTACCGA TCCAACAGCT ATCGCTCACC
CATCTCTGTT CCGCCTTCCA CTCCCGTGCG ATACGATCCG TTCCGTGCGT TGTTGTTCCC
CCTTCTCCTG TTTGCCGTTC CGCTACAGGC CGAAGTCAAA GGACCCACGG GAACACCGTA
CGAGAACAAA TTCTTTCTGC TCAAGCTCGT CTTTTCCTCG GACTTTCCGG CGGTCCCGCC
AAGGGGTTTT TTCTTGACCA AAATCTACCA TCCCAACGTG GACAATGCGA CGGGTGCCAT
TTGCGTCAAT ACGCTGAAAA AGGACTGGAA CGCCACGACG GCATTGTCAC ACGTTCTAGC
GGTCATTCGA TGTTTACTGA TTGTTCCCTT TCCCGAGTCG AGTTTAAACG ATGAAGCGGG
CAAGTTGTTT ATGGAAAGCT ACGAGGAGTA CTCGAAGCGG GCTCGATTGA TGGCGGACGT
TCACGGGCGG
 
Protein sequence
SASENLPPRT LARVAREVRD LHKNPPEGVR LVVDSDTGVP SNLSELMAEV KGPTGTPYEN 
KFFLLKLVFS SDFPAVPPRG FFLTKIYHPN VDNATGAICV NTLKKDWNAT TALSHVLAVI
RCLLIVPFPE SSLNDEAGKL FMESYEEYSK RARLMADVHG R