Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_5608 |
Symbol | |
ID | 7198320 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011691 |
Strand | - |
Start bp | 431134 |
End bp | 431923 |
Gene Length | 790 bp |
Protein Length | 161 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184462 |
Protein GI | 219128525 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | AGCGCTTCGG AAAATCTGCC ACCCCGTACG CTGGCGAGAG TTGCTCGCGA AGTGCGGGAT CTGCATAAGA ATCCACCAGA AGGTGTCCGA CTGGTAGTAG ATTCAGATAC CGGCGTTCCC AGCAATCTTT CCGAACTCAT GGTACGTCCA AAAATCGCCC TAAAACGTTC GATCGCAAAA GCGCTCCGTT CGGTCCCATC ATGGTAACCC CCCTCCTGTG AATTCCGTAC CGCCGGGTGC GACACTCGAC TTCGTGTCAA CTTTACGCGG TCGGGTCCGT TTTAACGGGT ATGCTACTTT TCTAGCTATT TAAGATTTGA AATGAGAACG CGACTACCGA TCCAACAGCT ATCGCTCACC CATCTCTGTT CCGCCTTCCA CTCCCGTGCG ATACGATCCG TTCCGTGCGT TGTTGTTCCC CCTTCTCCTG TTTGCCGTTC CGCTACAGGC CGAAGTCAAA GGACCCACGG GAACACCGTA CGAGAACAAA TTCTTTCTGC TCAAGCTCGT CTTTTCCTCG GACTTTCCGG CGGTCCCGCC AAGGGGTTTT TTCTTGACCA AAATCTACCA TCCCAACGTG GACAATGCGA CGGGTGCCAT TTGCGTCAAT ACGCTGAAAA AGGACTGGAA CGCCACGACG GCATTGTCAC ACGTTCTAGC GGTCATTCGA TGTTTACTGA TTGTTCCCTT TCCCGAGTCG AGTTTAAACG ATGAAGCGGG CAAGTTGTTT ATGGAAAGCT ACGAGGAGTA CTCGAAGCGG GCTCGATTGA TGGCGGACGT TCACGGGCGG
|
Protein sequence | SASENLPPRT LARVAREVRD LHKNPPEGVR LVVDSDTGVP SNLSELMAEV KGPTGTPYEN KFFLLKLVFS SDFPAVPPRG FFLTKIYHPN VDNATGAICV NTLKKDWNAT TALSHVLAVI RCLLIVPFPE SSLNDEAGKL FMESYEEYSK RARLMADVHG R
|
| |