| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_55086 |
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| Symbol | P5CS |
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| ID | 7198171 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011691 |
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| Strand | - |
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| Start bp | 443526 |
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| End bp | 446454 |
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| Gene Length | 2929 bp |
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| Protein Length | 747 aa |
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| Translation table | |
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| GC content | 56% |
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| IMG OID | |
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| Product | delta l-pyrroline-5-carboxylate synthetase |
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| Protein accession | XP_002184463 |
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| Protein GI | 219128528 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AATCGACCCG GATATCCTTG GCTTTCTTTG AAGTCGTCGT ACCAATTCAT CGGTCGCTAG
ACACAACTTT CCCAACAGTA ACAACAAGAG TAACTACACA CGATACTCAT ACAACAACAA
CAATCATATA ATCACGCAAG AATGATGCTC AAGATGCAAG CAACCGACTT TGGCAATTCC
CGCAACGAGT GTCGTTCGCG TGCGGCGTTG CGCATGGCGC GACGCGTCGT CATCAAGGCC
GGCACTTCGG TGGTGGCGAA CGACGACGGG TCACCGTCGC TCACGCGTCT CGGCGCCATT
GTGGAGCAGA TTGCGGCACT GAATCAAGCC GGCGTCGAAG TCATCTTTGT GAGTTCCGGA
GCCGTCGGCA TGGGCAAGAA TCTCTTGCGC AAACAGGCAC GCCTCAACAT GAGCTTCAAG
GATCTGCACA AGTCCGACAG TCACCACGCG CACTTGGGGA GTGGACTGCA CGCCGTCACG
GAAGACACGC ACGACACCAT TCTGCCGGAT TCGCATTCCG CACACGCACA ACGACTCACC
CCGACAACCT CCATCTCCGA TCTACTCACC ATTAACGAAC ACATGGAAAC ATCCGCCGCA
AAGTCCTACG CGGCGGCGGG ACAATTCGAA CTCATGAATC TCTACCAGAG TCTCTTCTCG
CCCAAGGGCG TCACGGCGTC GCAAATGTTG CTCACACAGG CGGATTTCGG GGACGCACAT
CATCTGCAGA ACCTACGCTA CGCCGTGGAT CGACTCCTCT CGCTCGGTAT TGTCCCCATT
GTCAACGAAA ACGATGCCGT ATCCGTACTG CCCGGAACCA CGCAAGAAGC CGAACCCGTC
TTTTCCGACA ACGACAGTCT CGCGGCGCTC TGCGCCCGCA CCTTCGGAGC CGAAGTACTC
CTCCTGCTCA CCGATGTGGA CGGTGTCTAC ACGCTCCCGC CCACACACCC CAAGGCCAAA
CTCATACCCT TTTATCACGC CAACACGGAA CAAGTCGGAA TCGGCGTCAA GAGTGCCCAA
GGTCGCGGCG GGATGGCCGC CAAAATTGAT GCCGCCCGGA ACGCCGTCGC ACCCGGATCG
GCCTGTACCG CCTGCGTTAT TTGCGCCGGG AGTGACCTCG ACGTCGTCCG TGCCGTACTC
AGTAAGGACT GGGACGGGGC CGAAACCGGC AAGGGCACTC TCTTTGCCAC CCCCGGTAGT
GACCTCGAAA CCCAAGCCCT CGATGAACTC GTTCATTCCG TCGAAGTAAG TTGACGTGTG
CTTGGTTGGT TGTCGTGGGA CTGTTGTAGT CGTACAATTG TTGTTGGGTC ATCTGTCGTG
CGAATGCTTG ATTATTCTTG TCAACCGCCC ACTCACATAT TCTTACACTG GACAGGACGA
AGAATCGTGT TCGGATGGGG CCCGCGATAT GGCCTTGCGG GCTCGCCGAG AAGCCCGTAA
ACTCCAGGCA CTCCCGGCCG AAGTTCGTCG GAATATACTC AACGCCGTTG CCGACGCCCT
GCTGACCCGC AAGGACGAAA TCGTACAGGC CAACCAACTT GATTTGGCCA ACGCCGCCCA
AGACAAAGTG GCGGGACCTC TCGTCAAGAG ACTCGGCTTG ACGGACGAAA AACTGGCCAC
GCTTGTGACC GGTATTCGCC AACTCGCCAC ACTCCCAGAT CCCCTCGGCA ACGTCAAGGC
CAAACGAGAA CTGGCCGACG GACTCGAATT GTCCCTCACC ACCGTCCCCA TTGGCGTACT
CCTCATTATC TTTGAATCTC GACCGGATAG CCTACCCCAA ATTGCCTCGC TCGCACTAGC
CTCCAGCAAT GGGCTCTTGC TCAAGGGCGG CAAGGAGGCC TACCATTCCA ACACGGCCTT
GCACGACGTT ATTGGAGATG CCATTGAAAA AGGCAGTGAA GGACTCATTT CCAAAGACAT
TATTGGTCTC GTCACGTCTC GTGGTCAAGT CAATGATCTA CTCTCCCTCG ACGACACGAT
CGATTTGGTC ATTCCTCGGG GTTCCAACGC CCTGGTCAGC TACATTCAGG AGAATACCAA
GATTCCGGTT TTGGGACACG CCGACGGCGT GTGTCACGTC TATATTGACG CCAGTGCGTC
GGCAGAAGCC GCGTGTCGGA TTGCCGTCGA CGCCAAGACG GACTATCCCT CCGCCTGCAA
CGCCATGGAA ACCTTGCTTT TACACGCCGA CACGGTCGAA AACGGCGTCG CCTTGAATGT
CTTACAGGCC CTCCGCTCGG CCGGCGTCAA GTGCCTCGGT GGCCCCAAAG CCATGAAGGC
TGGATTAAGC GACGTGGCCA CCCAAAAGAC CAAGCACGAG TACGGCGATT TGACGTGCCT
GGTCGAAATT GTCGACAGCA TAGACGAGGC TATTGACTGG ATCCACGAAA ACGGTAGTGG
CCACACCGAA GCGATTGTGT GTGCGCCGGA CTCGCCCGCC GGAGAAATTT TTCTACAAAA
GGTCGACGCC GCTTGCGTCT TTTGCAATAC CTCGACCCGT TTCGCCGACG GTTACCGGCT
CGGGCTCGGC GCCGAAGTGG GTATTTCCAC CGGTCGGATT CATGCGCGGG GACCCGTCGG
AGTCGAAGGA CTTTTGACGA CCAAGTGGCA GTTGCGTAGT CTGTCGGGAG AATCTTACCT
GGCGACCGAC TTTGCCGGGG CCGACCCGAA ACGGACGTTC ACCCACAAGA ATTTGCTGTA
AGCTCAGGTT ATGGGTGGTA GTGGCTGGTA TCTCTGTTGG GCCTCGGTAC GTACGGACTT
TTTTGGTTGG GATACGATAA ACGCCCTCGA ACTACGGTGT GATTGTGTGT AGCTCATTGA
CTGTGAGTAG ACGATGGCAC TCTCGGCAGT TTTGCATCCG CACACATATC CACGCCACCT
CTCGTTTTAG ATTAATCTCA TTGTTCTATT AAAACAAACT GGACAATGT
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| Protein sequence | MMLKMQATDF GNSRNECRSR AALRMARRVV IKAGTSVVAN DDGSPSLTRL GAIVEQIAAL
NQAGVEVIFV SSGAVGMGKN LLRKQARLNM SFKDLHKSDS HHAHLGSGLH ASYAAAGQFE
LMNLYQSLFS PKGVTASQML LTQADFGDAH HLQNLRYAVD RLLSLGIVPI VNENDAVSVL
PGTTQEAEPV FSDNDSLAAL CARTFGAEVL LLLTDVDGVY TLPPTHPKAK LIPFYHANTE
QVGIGVKSAQ GRGGMAAKID AARNAVAPGS ACTACVICAG SDLDVVRAVL SKDWDGAETG
KGTLFATPES CSDGARDMAL RARREARKLQ ALPAEVRRNI LNAVADALLT RKDEIVQANQ
LDLANAAQDK VAGPLVKRLG LTDEKLATLV TGIRQLATLP DPLGNVKAKR ELADGLELSL
TTVPIGVLLI IFESRPDSLP QIASLALASS NGLLLKGGKE AYHSNTALHD VIGDAIEKGS
EGLISKDIIG LVTSRGQVND LLSLDDTIDL VIPRGSNALV SYIQENTKIP VLGHADGVCH
VYIDASASAE AACRIAVDAK TDYPSACNAM ETLLLHADTV ENGVALNVLQ ALRSAGVKCL
GGPKAMKAGL SDVATQKTKH EYGDLTCLVE IVDSIDEAID WIHENGSGHT EAIVCAPDSP
AGEIFLQKVD AACVFCNTST RFADGYRLGL GAEVGISTGR IHARGPVGVE GLLTTKWQLR
SLSGESYLAT DFAGADPKRT FTHKNLL
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