Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49705 |
Symbol | |
ID | 7198178 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011691 |
Strand | + |
Start bp | 489048 |
End bp | 491857 |
Gene Length | 2810 bp |
Protein Length | 830 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184377 |
Protein GI | 219128348 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGATTGAGTT ACCGATTAAT TACAATACAA TCGGGGCCTT ACGAGGCTTT CCCCTTTATT CATCTTACTC TCTCATTGTA TCAACAATAC ATTGCGTGAG TATAGAAGAA TTCGTTAGTT TATCAGACCC AGCAATCATT GCTGGCGTTG CTCTCGCCAA CGTTCTTCCT TTACACGATT GTCTCTCTTT TTGAACTGAG CCATGGCCCG AGTTCGCAAG GCAACCGGTC CTACCCGGAA GGGAGCGACC GAAATGGTGC CGGAGGAGCG AGTGGAAGAA GAAACGCCCT TTGAGGCCGT TGAGTCGCCG TCCAAGGACA GTGACAATGA GACGCAACCA TCGTCCATGG GCGATGATAA TGACTCACAG TCTGAGATCG AGTCGTACAA GATTGATACC GACATTGATT TCAAGTACAA CCCAAACTTT TTTGAGGACA AGAAAGCCCT TGAAAGTGTT CTAAGGAATA CTATGGGATT TGGAGATATC CATGTGAAGT CACTCCAAAA CGAAGGTTTG AAGACCGCAA ATGATTTCTT GCTTATTTCT ATGAGTGACA TCAATGATCT TTGCGACAAG CTTTTGTTTG CAACAGTTTA CAGGGCTCGC CTACGGGCAT TTGCTACATG GTTACGTAGT CAACCCGACA ACATAAATAT TACCCAAGAA TGGACAATTC CAGTTATGCA ATTGGAAATG CAGATGAAGG CGCAAGCGTC TCCATCAAAG CGGCAAAGCG TAGAGCGTCT ACGGACCCGC GCACGGCTAA AAGAGCCAAG ACTAGTAGTA CGGATAACTC TAACGCAAGC GTTGAGTCCT ACTCGCCTGA TTTAAGGTCA ATGTCTACTG AAATATTTAA AGCAGATGAT GACAAGGACT TGGCTTCATC AACTTGAATC AGATTCGGCA CGCCGGACAT CAGACTGATG ACATTCCGAA GTTTTTATCC CAAGGGAAAT CTCTTCACGG AATTGAAACA ATTGATGGCG ACTACATTCC TTTTGAATTG AAGGGACGCA CATCATTGTT GTACTCACGA GTACCTACTC GCCATGAGCT TGAGAACTGC CTGCACATTG ATCTCACATC TGATCAACCC TGGGATCCAA ACAGCAAAGA CTGGGAGGAT AATGAGCAGC GCTACACGCG TCATGACCGA CAACGGAATG CACGCTATAC CGCAACTGAT AATGCGGATG AGGAGAACTT TTACCATGGG TATTTCTCTC TCCCTGACTC TAAGGAGTTC CCGGTTCTAC CGGCAAACAA TAATGTTATG AACCCACATG ATGTCGTACG CGAGATCAAA TATGCTACTG CACGGGTTTC AAAATCTAGC CCACGGGATC TAGATGTCGA TCGAGACAAA CTTCGCCGCA TCCTGGGACA TGTTCCTATG GAAGTAGTTG ACCGAACACT GGAAGCTACA ACACAACTTG CGGAACGCTC TGGCAAAATG CCACTGCATC GACGTTTTAA AACGAAGTTT GAACAATTGC GATACCGCCG GTTGAAGTGT ACGTTATATA GCGACACTTT CAAATCTACT GTTAAATCCT CCCGAGGACA CACGCATACC CAAGGGTTTG TATGTGGTGA TTCTTACTTT GTATACCACT TTCTTATGAA AGCGGAATCC GAAGCAGACC AAGGTCTTGC GTCAATTATA CAAGATATAG GAATTCCGGC ACAAATTCAC ACCGACAACG CAAAAGTGGA AACCTTAAGC AAATGGAAGA AAATCACTTC CGGTCACTGG ATAAAAGTCA CAGTCACGGA ACCATACTCA CCGTGGCAAA ACCGTTGCGA ACACGAATTC GGTGCGGTTC GGATCCAGAC ACGACTTGTT ATGGAAACGA CACAATGTCC AGAACAGCTT TGGGACTACG CCATTACCTA CGTGGTAATT GTGCGTAATA ATACCGCTCG CAAAGCCTTA AATTGGCAAA CGCCATTAAC GGTTATGACA GGTGACACGA GCGATATTTC AGAATTGTTG GATTTCGAGT TCTACGAACC GGTACAATAT TTTGACAATC CTGAAATTAA ATTTCCTCAA GCTAAGGCTA AAGTTGGTCG GTGGCTTGGT ATTGCAACAA ATGTTGGACA AGCTATGTGC TACTATGTCC TAACAGACAA AGGAACCGTG ATAGCGCGAT CCACAGTCAC ACCACTTCAC AAAGTTGATT CGACTGCTTT GCAAACCTCT CTTACAGCTT TTGATGCTAT GATAAGGGAT ATTTATCAGC CTACTGATTT TGCTCACAGC ACTAAAAAGC AAGCAGCCTC GTTACGACGA GATGAAGCAA TGAAGGTTGC CAGAAAAACT GGTGAACCTG AAGATCCAGG AGTCCGTAAT AGACATGTTC TGTATGACTT AAATGAGGGA GCCGACCATG ACCAAGTGGA ACCAGGACTA TCAGTTGATG ATTACTACGG TAACGACGAC GAAAAAGAGT CTGGTTCGTC GGATCTCCTT GTCGGCAGCG AAGTACTCCT TACTAAGGGA GGTATACAAC ATCTAGGCAA AGTCACCAAG CGTGATAAAA TGGCCAGCCC AAGGGCTCAA ACGAAACAAC CAATTATGTT GTTGAGTTCA ATGATGGTAC TGAAGAGATT CATGGATACA ATGCTCTGCT TGACGCTGTG TATAAGCAAG TCGATGATGA TGGTAATGAA TGGTATACTT TTGAAGATAT TGTTGACCAT CAAAGGCGCC CACGTGGCGG CCGAGGACGA ACGAAAGGTT GGTTCCTCCG TGTTAAATGG GCCAATGGTG AATACACCTG GGAGCCTCTT ACCTCTTTAA
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Protein sequence | MARVRKATGP TRKGATEMVP EERVEEETPF EAVESPSKDS DNETQPSSMG DDNDSQSEIE SYKIDTDIDF KYNPNFFEDK KALESVLRNT MGFGDIHVKS LQNEGLKTAN DFLLISMSDI NDLCDKLLFA TVYRARLRAF ATWLRSQPDN INITQEWTIP VMQLEMQMKA QASPSKRQSV ERLRTRARLK EPRLVIRHAG HQTDDIPKFL SQGKSLHGIE TIDGDYIPFE LKGRTSLLYS RVPTRHELEN CLHIDLTSDQ PWDPNSKDWE DNEQRYTRHD RQRNARYTAT DNADEENFYH GYFSLPDSKE FPVLPANNNV MNPHDVVREI KYATARVSKS SPRDLDVDRD KLRRILGHVP MEVVDRTLEA TTQLAERSGK MPLHRRFKTK FEQLRYRRLK CTLYSDTFKS TVKSSRGHTH TQGFVCGDSY FVYHFLMKAE SEADQGLASI IQDIGIPAQI HTDNAKVETL SKWKKITSGH WIKVTVTEPY SPWQNRCEHE FGAVRIQTRL VMETTQCPEQ LWDYAITYVV IVRNNTARKA LNWQTPLTVM TGDTSDISEL LDFEFYEPVQ YFDNPEIKFP QAKAKVGRWL GIATNVGQAM CYYVLTDKGT VIARSTVTPL HKVDSTALQT SLTAFDAMIR DIYQPTDFAH STKKQAASLR RDEAMKVARK TGEPEDPGVR NRHVLYDLNE GADHDQVEPG LSVDDYYGND DEKESGSSDL LVGSEVLLTK GGIQHLGKVT KRDKMASPRA QTKQPIMLLS SMMVLKRFMD TMLCLTLCIS KSMMMVMNGI LLKILLTIKG AHVAAEDERK VGSSVLNGPM VNTPGSLLPL
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