Gene PHATRDRAFT_49701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49701 
Symbol 
ID7198175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011691 
Strand
Start bp474277 
End bp475541 
Gene Length1265 bp 
Protein Length375 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184468 
Protein GI219128538 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGAAAAAGTA GTCATTGCCC AGTGTTTCTT CTTTGGAAAC AACACACAAA TTAACTGGAA 
ACACCACAAC AAGCAAGTCG AGGCAGTCGT AACTTTCACA GTCAACACAG CGCTCGTCGA
CAACAATCAT CGCCAGTATG ATTCACCAGA TTCCGTTGGA AGTCGAACCG ACGACTTCTT
CGCTCAACAA GCGCAGTCAC GCTGGCTTGA AAGCTCATGC TGCTCCCAAT GATGTGACGG
AGGTCCAGCA GCTGTCAACG TCGTCTCTGA ACGCCCTAAG AACTCGACAA GCCATGTGGG
CGGTACTGTG GAAGGACATT GTCAAGGAAT ACGCCGAAGA AGAACCCGAA ACAGCGACGT
CTTCCGGATC TCTTTCGTCC GATGATGATG ACGAGGACGA AGAAGAAGAA ACAGGCATTG
CACAAGCGCT TGTGCGCGCC GCCTTTTCGC CGACTCTCTC TACTCCAGAC TTGGCCAAAC
TCGTCATGAA TGTGACCGGT ACATCACACC AGACGACAGT CGACGAAGGC CCCGTGACCA
AGAAAGCTCG AGTGGAATCG GACAGTCACC AAACCTCCGG CCCTCCCATG GAATCCATCA
AGTTCACCAA CAATTGTCAA GTTCGTCGTC ACTCCATGAA GCTCAGCGTC TCGGCCCCGT
CGCTCCTGCA CGTTGATCAA CGCACCATGC AAGCCTCCAC TGACCTTTCC GCCACCATTA
CCAACGCCGT CAAACCCGAC GACTTGTTGC GTGAGATTCT GACTTCCAAG GATCGTTCCA
TCGAGACGTT TGCCGCAATG GACCTGGAAC AGGACTTTTT TGAGCCCGTG ACCGAAGCCG
CCATTACCGC CTACGATATG CCGGTTGTAC AAGCCGTCCG CGAAGCAGAA ATCGAAACCT
TGCACCGGAT GAAGGAATCT GGCCGTGATC TCAACGCACG AAACAAGTTT GGTGAGTCCG
TCTTGCACAT TTGTTGTCGC CGCGGATCCA CGCAAGTCTT GGATTTTCTA CTCCAGCAAG
TGCAACTTTC GCCCCGCGTC TGCTGCGATT ACGGCCGCAC GCCTCTGCAC GATGCTTGCT
GGACGAGCTC GCCCAATTTT GCAATCATTG ACATGTTGAC CAAAGTGTGT CCGGATTTGT
GGCACGTGCG CGACAAGCGG GGATTTACAC CGCTCGAGTA CGTCAGTCGG GAGCAATGGA
ACGTTTGGGG CACCTACTTG CGCTCTCGTT CGGTGGAGCA GTTGGCGGCG CGAGAGTTGA
TGTGA
 
Protein sequence
MIHQIPLEVE PTTSSLNKRS HAGLKAHAAP NDVTEVQQLS TSSLNALRTR QAMWAVLWKD 
IVKEYAEEEP ETATSSGSLS SDDDDEDEEE ETGIAQALVR AAFSPTLSTP DLAKLVMNVT
GTSHQTTVDE GPVTKKARVE SDSHQTSGPP MESIKFTNNC QVRRHSMKLS VSAPSLLHVD
QRTMQASTDL SATITNAVKP DDLLREILTS KDRSIETFAA MDLEQDFFEP VTEAAITAYD
MPVVQAVREA EIETLHRMKE SGRDLNARNK FGESVLHICC RRGSTQVLDF LLQQVQLSPR
VCCDYGRTPL HDACWTSSPN FAIIDMLTKV CPDLWHVRDK RGFTPLEYVS REQWNVWGTY
LRSRSVEQLA ARELM