Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49701 |
Symbol | |
ID | 7198175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011691 |
Strand | - |
Start bp | 474277 |
End bp | 475541 |
Gene Length | 1265 bp |
Protein Length | 375 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002184468 |
Protein GI | 219128538 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGAAAAAGTA GTCATTGCCC AGTGTTTCTT CTTTGGAAAC AACACACAAA TTAACTGGAA ACACCACAAC AAGCAAGTCG AGGCAGTCGT AACTTTCACA GTCAACACAG CGCTCGTCGA CAACAATCAT CGCCAGTATG ATTCACCAGA TTCCGTTGGA AGTCGAACCG ACGACTTCTT CGCTCAACAA GCGCAGTCAC GCTGGCTTGA AAGCTCATGC TGCTCCCAAT GATGTGACGG AGGTCCAGCA GCTGTCAACG TCGTCTCTGA ACGCCCTAAG AACTCGACAA GCCATGTGGG CGGTACTGTG GAAGGACATT GTCAAGGAAT ACGCCGAAGA AGAACCCGAA ACAGCGACGT CTTCCGGATC TCTTTCGTCC GATGATGATG ACGAGGACGA AGAAGAAGAA ACAGGCATTG CACAAGCGCT TGTGCGCGCC GCCTTTTCGC CGACTCTCTC TACTCCAGAC TTGGCCAAAC TCGTCATGAA TGTGACCGGT ACATCACACC AGACGACAGT CGACGAAGGC CCCGTGACCA AGAAAGCTCG AGTGGAATCG GACAGTCACC AAACCTCCGG CCCTCCCATG GAATCCATCA AGTTCACCAA CAATTGTCAA GTTCGTCGTC ACTCCATGAA GCTCAGCGTC TCGGCCCCGT CGCTCCTGCA CGTTGATCAA CGCACCATGC AAGCCTCCAC TGACCTTTCC GCCACCATTA CCAACGCCGT CAAACCCGAC GACTTGTTGC GTGAGATTCT GACTTCCAAG GATCGTTCCA TCGAGACGTT TGCCGCAATG GACCTGGAAC AGGACTTTTT TGAGCCCGTG ACCGAAGCCG CCATTACCGC CTACGATATG CCGGTTGTAC AAGCCGTCCG CGAAGCAGAA ATCGAAACCT TGCACCGGAT GAAGGAATCT GGCCGTGATC TCAACGCACG AAACAAGTTT GGTGAGTCCG TCTTGCACAT TTGTTGTCGC CGCGGATCCA CGCAAGTCTT GGATTTTCTA CTCCAGCAAG TGCAACTTTC GCCCCGCGTC TGCTGCGATT ACGGCCGCAC GCCTCTGCAC GATGCTTGCT GGACGAGCTC GCCCAATTTT GCAATCATTG ACATGTTGAC CAAAGTGTGT CCGGATTTGT GGCACGTGCG CGACAAGCGG GGATTTACAC CGCTCGAGTA CGTCAGTCGG GAGCAATGGA ACGTTTGGGG CACCTACTTG CGCTCTCGTT CGGTGGAGCA GTTGGCGGCG CGAGAGTTGA TGTGA
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Protein sequence | MIHQIPLEVE PTTSSLNKRS HAGLKAHAAP NDVTEVQQLS TSSLNALRTR QAMWAVLWKD IVKEYAEEEP ETATSSGSLS SDDDDEDEEE ETGIAQALVR AAFSPTLSTP DLAKLVMNVT GTSHQTTVDE GPVTKKARVE SDSHQTSGPP MESIKFTNNC QVRRHSMKLS VSAPSLLHVD QRTMQASTDL SATITNAVKP DDLLREILTS KDRSIETFAA MDLEQDFFEP VTEAAITAYD MPVVQAVREA EIETLHRMKE SGRDLNARNK FGESVLHICC RRGSTQVLDF LLQQVQLSPR VCCDYGRTPL HDACWTSSPN FAIIDMLTKV CPDLWHVRDK RGFTPLEYVS REQWNVWGTY LRSRSVEQLA ARELM
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