| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49666 |
|---|
| Symbol | |
|---|
| ID | 7198306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011691 |
|---|
| Strand | + |
|---|
| Start bp | 351543 |
|---|
| End bp | 353559 |
|---|
| Gene Length | 2017 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184350 |
|---|
| Protein GI | 219128292 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTATTCCTAC TTGCTCTATT TCCACAGCGG CATGAATTAC GGTGATACGT TTCGCACTGC
GGGAGTCGGC GCGGCGGCCA AGACGGCACC GTCCACATCC GAGCCGGACC ATTTCGGTTT
GTCCGACAGT TACCTCTATC CAACGCAAGA CACGGGCTCG TTCGATGGTG ACGACGACCA
TTATCATCAT CATCATCACC GTTACCAACG AACGTCCCGG CGCAAATGGA TGTACTACAC
TTTACTCGGT GTTCTCGTTG TAGTTGGAGT CGCCCTGGGA ATTGCCGTAG CGGTGGAGCG
CCGCAACAAT AACAGCGGTA GCCCAAGCAG CCAAAGTAGC AACCAAGGCG GTACCGGTTC
CGCACCTTCC GGGAACAACG ACAAGAACAA CGATAGTGGT GTCCCCCGAT CCCCCGTCTA
CGAAATCTTG CAACCTTTCG CGTTGCGAGG CGGGGCCGAA TTCAACAACC ATGATTCCTA
TCAGTTCAAG GCACTCCAGT ACGTGGAAGC ACACGCCGTC GCCCACAACA CCACTTCCAC
CACGAATGCC CAGTCCGCGC TCTTCACGGA CAGTCGTATC GTCCAACGCT ACGCTTTGGC
CTGTATTTAC TACGCCACCT ACCAGGTCCC TACGACTTGG ACGGGTTACC GCTTCGCCAG
CCGTTCGCTC CTGCCTTGGC AGAACAGCAC CGGCTGGCTA AACGAACAAT TTCCGGACGA
ATGCGACGGA TGGTTTGGTA TTCGTTGCGA CACGCAGACT CGTCAAGTCG TCGAACTCGA
TTTCGCGTCC AACGTACTCA CTGGTACCAT GCCACCGGAA ACGGCCCTGC TCCGAGCCCT
ACAAATTCTT GATCTCTACA ACAATCACGT GTACAACGTC GGCGCTGCCG GCAACGATTG
GCTCGGAAAT CTGACCAACT TAGAACAATT GTTTTTGGGG AAATCGCCGT TCGTTACCAT
TGACGAAGGC ATTCCCACGG CGCTCTCACG GCTGTCCAAA CTCCAGGATC TCGACGTATC
CTACACACTC TACCGCGGCG CATTGCAACC CTCCCTTTTT CGCAACTGGC CCGACTTGGT
TTATTTAAAA ATGGGCGGCA ACAGCTACAA TTCATCCCTC CCGCTCGCTC AGGCCAATCT
GCCCTCCCTC AAGTACCTCT ACGCAGAATA CACCGATCTG CACGGCACTC TCAGGAACCT
GTTTGTCAAA GCCCCATCCC TCGTGGAAGT TTGGATGGAT AGAAATCCTC GGCTTTCCGG
ATCGCTACCC ACCAACATGG GCAACGACGC CCCCGGATTG GCTTCCGTGT CCTTTACGCA
CTGCAACTTG ACTGGGACCA TCCCCAGCAG TCTCGCATCC ATCCCGGGAC TACAACAAGT
GTGGTTGTAC GATAATGCAC TCAGGGGTTC CGTGCCAACC GAATTCGGTG CCTTGTTGGG
TTTGGAACGC TTACAAATGG AACAAAATCA ACTCACCGGA ACAATGCCAG CGACATTGTG
CCAGCAAGTC GCCCCCCTTG GCCGTTTACA GCATTTGACG GTGGACTGCG AGGAGATTGG
TGGTGTCCCA CCCGAAGTGA AATGCGACGA ATCGTGCTGC TCCTGTTGTG GACCCTCCTG
TATCACCAAC GGTGCCAACA TGGGCGCTCG GTAAGGTTGA TCGGTAGCGA TGGACCGGAG
GCGAGCGAAC CAACAAAGAT GCCGCCATCT TCTACGACGA GACCACAGAG AAACCTCGGC
TTGATTCCGA CTATTGTTTC TTGCTCAATC GAAACCTCTG GGGAGCGATG TTGAACGCAC
ATGCTAGCCT CATCTTCATA GATAGCCAGC GGTAGGGTAC TGAACAGAGG TCGACCGAGA
GTACTTTTTC CGATGAAGCT ACAAAAGTGC TTGGCGATTT GCCCTCTGAT TAGTCGATTT
TACGCTACAA GTAGTATCAC AGCTATGCCA ACAGTAGCGG TGAATGTTTT GTTTACGAAG
ATCCCATTTC TTCTAAAAAC TATTTTAATA GGCAATA
|
|---|
| Protein sequence | MNYGDTFRTA GVGAAAKTAP STSEPDHFGL SDSYLYPTQD TGSFDGDDDH YHHHHHRYQR
TSRRKWMYYT LLGVLVVVGV ALGIAVAVER RNNNSGSPSS QSSNQGGTGS APSGNNDKNN
DSGVPRSPVY EILQPFALRG GAEFNNHDSY QFKALQYVEA HAVAHNTTST TNAQSALFTD
SRIVQRYALA CIYYATYQVP TTWTGYRFAS RSLLPWQNST GWLNEQFPDE CDGWFGIRCD
TQTRQVVELD FASNVLTGTM PPETALLRAL QILDLYNNHV YNVGAAGNDW LGNLTNLEQL
FLGKSPFVTI DEGIPTALSR LSKLQDLDVS YTLYRGALQP SLFRNWPDLV YLKMGGNSYN
SSLPLAQANL PSLKYLYAEY TDLHGTLRNL FVKAPSLVEV WMDRNPRLSG SLPTNMGNDA
PGLASVSFTH CNLTGTIPSS LASIPGLQQV WLYDNALRGS VPTEFGALLG LERLQMEQNQ
LTGTMPATLC QQVAPLGRLQ HLTVDCEEIG GVPPEVKCDE SCCSCCGPSC ITNGANMGAR
|
|---|
| |