Gene PHATRDRAFT_49663 details

Gene Information

• Locus tag: PHATRDRAFT_49663
• ID: 7198150
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011691
• Strand: -
• Start bp: 343494
• End bp: 345765
• Gene Length: 2272 bp
• Protein Length: 567 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002184446
• Protein GI: 219128492

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TACACACACA ATTTTCCACG TGACTTTTCC ACGGGACCCG CGCCTCGATT GTAAATCTAC 
CGTGTTACCG TTAGTTCGAG TGTCGAACAG TAAATCCCTC TCCGATCCAA GAGTGAATTG 
TCGACAATCA TTCATCCACA TGTCGTTCCA TACCAGCACC AACTCTCCCA ACAGTCTCTT 
AGCGCCTTCG AGAAGAAGCG TTGCCTCGTT GCCTTTGCCC TCCCCAACGA GCCCCACCAA 
AATATGTCAA TGCGAACAAC CCGTGCGAGG TCCCCACCAG TCCGTTTCGG GCGCGGAATC 
TCGGGGGGGA CGCGAGGGGT GCCAAAAATG TTGGGGTCGC GTGGCCTCGC GCAAACATGC 
CCCACTCTCT CCCGTTGCCC AACGTACACT CCGAGATTCT TCCGAAGATG AAGACAACGA 
CGATGAGACC ACGGTAGGTT CGTCCCTAGA GGAAGAATGC AGTGAACGGT CTCTTCCGCT 
CAAGAAGCGC GCTCGTACGG AAACGGTGGC GCCCGTAGCC GTTGCTACTA CGGATACTTC 
TTCCCCGAGC TCTCCCCGCT CCCAACGCGA GCTTTTGTCG GAGTCGCTCT TGCTGACGAC 
GACGACGACA ACTAGTGAAA CGGTCCCGAT TTATAACCCT ACGGCAACGG ATCAAACGGC 
TGCGCTCATT TCCAAAGCAA TCAAAAGCAT CAATTCCACC GAGAAGCCAG TCTCCGTTCA 
GCACGGAATG ACCGTCTTGG AGGCTTTGGA ACACAGTTTA CGGGGTCTTT CCAAGGAAGA 
TGCAGCCGAA GCGCGCTGGC AATTTCACTA CATGGAACTG ACGGAATATC GCAAGAAGAA 
CGGGCATTGG TATGTCTCTT GTTGTCGATG CCGTCTTTGC TGCAATGGTA CCTGCTTATT 
TCGAAACCTC TCGTCTCACT TGGATATTCT CCATCATTTT GTTGTAGTCT GGTGCCGCGA 
CCGCATTCCA CTCTAGGAGC CTGGGTAAAC ACACAGCGAG TCTTGTACGC CAAGCGTCAG 
CGGGGTGAGC CTTCGTCCTT GACACCCTTG CGTATTCGCC AGCTAGAAGC CTTGGATTTT 
GTTTGGGACG ATTATGGCAA GCGTTGGAAC GACCTCTACC AGGAGCTGGT GGCGTACAAA 
AAGAAAACCG GTAGTTGGTA CGTGTGTGGA AATTTCGAAA TTCGGAGGGT GTCATCAGAT 
GTCCTTGATA CCTGTACCTG TTCACATGCT CACAGCTCTG GTTGTTGTCG CTTGTGTTCC 
CGACAGTATG GTACCCCGTT CCTTCCCGGA AAATCCCAAG CTTGGCCGTT GGGTCTACAC 
ACAACGTACC CGATATACGC AGTACGCCCT GAGTCCGGAT CGCGTGGCAA AGCTGGACGA 
CCTTGGCTTT GTCTGGAAGA TCTTTGCCCG GTCCAACTGG CACGATTGCT ACCAGCAGCT 
CGTGGACTTC AAACAGGCGT ACGGACACTG TCGAGTGCCG CGGCAGTACG ATGAAAATCG 
CAAGCTAGGT AGTTGGGTAC AAACACAGCG GACGGAAATG AAGTACCGCA AAATGGGACG 
GCCGTCTCGT ATGACGGAAG ACCGAATCGA GCTATTAAAC GATCTCAGGT TTGAATGGAA 
AGTCAATCAG ACAAAAGAGC TCGGCTCGTT CACTGCATCG GGATAGATAT CCGGTACTGT 
TGGAGTTCCG AGTTCCTTGT ATATGCTTGG TGTTTATTCA GAAAGGTTAT TTTTACTAGT 
TGACGTGTTA CATTTCTTCT TGATACCGTA GTATTCAGGT GACTGCGTTT CGAACGAGTC 
GTTTTCGTGA TTACTACTCG TCTTGTATAG GCAGCGGTTG GTGCAAAGCC TCCGCAACTC 
GGCACCAGTT CCGCGCTTGG ACGAGTCTAT TCGCGTTGTT TTGTTTGACG ATACTCAGCA 
TTTTGGGATC GTGCTCGTGA TGCCATTCAC GCAGACTCCT GGAAGACGCC AAGGACTGTA 
CTACCCCCAC ATCGGTGGCG TGTGCGTTGG GGCGCACTCG GAGCAAACGC ACGTCCGCGT 
CGATGGCGTG CGGCGACGAG GATTCCAGCT CTGGTGGCGA CGTGCGCGCC AACAACCCTC 
TGCCTCGAAA ACACGCTGCA TCGGTTGTAT CGTTCAACCG AGCCGGCTGA AAGTACACCG 
AGACGGGGGC TTTGCCGGAA AACGACACGT TGCAAGGCAG GACGTGAAAT TCCGTCCGAG 
CATTGCGTGC AGTAGTATCT TCGCTTGGCG CGACGCTCAT TCTACAGAGT AA 

 

Protein sequence

MSFHTSTNSP NSLLAPSRRS VASLPLPSPT SPTKICQCEQ PVRGPHQSVS GAESRGGREG 
CQKCWGRVAS RKHAPLSPVA QRTLRDSSED EDNDDETTVG SSLEEECSER SLPLKKRART 
ETVAPVAVAT TDTSSPSSPR SQRELLSESL LLTTTTTTSE TVPIYNPTAT DQTAALISKA 
IKSINSTEKP VSVQHGMTVL EALEHSLRGL SKEDAAEARW QFHYMELTEY RKKNGHCLVP 
RPHSTLGAWV NTQRVLYAKR QRGEPSSLTP LRIRQLEALD FVWDDYGKRW NDLYQELVAY 
KKKTGSCMVP RSFPENPKLG RWVYTQRTRY TQYALSPDRV AKLDDLGFVW KIFARSNWHD 
CYQQLVDFKQ AYGHCRVPRQ YDENRKLGSW VQTQRTEMKY RKMGRPSRMT EDRIELLNDL 
RQRLVQSLRN SAPVPRLDES IRVVLFDDTQ HFGIVLVMPF TQTPGRRQGL YYPHIGGVCV 
GAHSEQTHVR VDGVRRRGFQ LWWRRARQQP SASKTRCIGC IVQPSRLKVH RDGGFAGKRH 
VARQDVKFRP SIACSSIFAW RDAHSTE