Gene PHATRDRAFT_49660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49660 
Symbol 
ID7198303 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011691 
Strand
Start bp336775 
End bp337661 
Gene Length887 bp 
Protein Length129 aa 
Translation table 
GC content44% 
IMG OID 
Productmacrophage migration inhibitory factor 
Protein accessionXP_002184347 
Protein GI219128285 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.014997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTCAAAGGGT TGGTAACGAG ATCATCATTT TTATCTTTGC TGCTATCAGT ATGCACTCGG 
TCGTCTTGCT TATATCATTG GTAATATTTC TTTCCATTCT CGTTCGCAGT CAATCTTTTT
CATTTTTACC AGGTGAGCGC TTCCGAACCA AACCAAGAAA AATGAGCGTA GAGACCCGTC
ATCCGTTCTG CGATCTTCCT GGAGATCCAT CGTTGATACT TACTACCAAC GTAGACCTTG
GTTCCAAAAA GCTGGACATT TTGAAAGGTA AGCAATCAAG ATATCGGAAC TAGCCTTTGT
GATTCACTTA GCTACCCGAA GGATCGCAAA ATCACACTTG CAACTTTCCG TATGCTTTAA
ATCGATAGCT ATTTCCAAAG CCATGGCGGA ACATACCGGG AAACCAGAAG AATACATCGG
TGAGTGCACG TGAATCTCTA CGACGGTGCA TGGTTGAGCA TTTGCCTCTC CATTAAATAC
GATCTAAACA CAAATTGTTT CGGACGCAGC CGTTTCCATT AACGACAATG CAGACGTTAT
CTTTGCCGGT TCAGACGCGC CCACGGCATT GGGTTGCATG TACTCTATTG GTGCGATTGC
GATGGAGAGT AACGGCAAGA TTACGGCATC TGTATCGGAT CTTCTGGAAG AATATGGCGT
CGACGCGGCT CGAATCTATA TCAACTTTTT TGACATGCCC CGGGCCAATG TCGGTTGGAG
CAAGCGAACG TTTGCTGGAT AAAATCCGAC CAACCGACAT GTTTTGTTTC CGCACTAGAC
AAATTACTAG ACAAGAAGTG CATCCAGGGT CATAGCAATC GAACGGACAG ATCGAAGAAC
AAAGTAGAGA ATAATTGGCA TTTACCGAAT TTCCCCAAAT TATTACC
 
Protein sequence
MSVETRHPFC DLPGDPSLIL TTNVDLGSKK LDILKAISKA MAEHTGKPEE YIAVSINDNA 
DVIFAGSDAP TALGCMYSIG AIAMESNGKI TASVSDLLEE YGVDAARIYI NFFDMPRANV
GWSKRTFAG