Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49660 |
Symbol | |
ID | 7198303 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011691 |
Strand | + |
Start bp | 336775 |
End bp | 337661 |
Gene Length | 887 bp |
Protein Length | 129 aa |
Translation table | |
GC content | 44% |
IMG OID | |
Product | macrophage migration inhibitory factor |
Protein accession | XP_002184347 |
Protein GI | 219128285 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.014997 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTCAAAGGGT TGGTAACGAG ATCATCATTT TTATCTTTGC TGCTATCAGT ATGCACTCGG TCGTCTTGCT TATATCATTG GTAATATTTC TTTCCATTCT CGTTCGCAGT CAATCTTTTT CATTTTTACC AGGTGAGCGC TTCCGAACCA AACCAAGAAA AATGAGCGTA GAGACCCGTC ATCCGTTCTG CGATCTTCCT GGAGATCCAT CGTTGATACT TACTACCAAC GTAGACCTTG GTTCCAAAAA GCTGGACATT TTGAAAGGTA AGCAATCAAG ATATCGGAAC TAGCCTTTGT GATTCACTTA GCTACCCGAA GGATCGCAAA ATCACACTTG CAACTTTCCG TATGCTTTAA ATCGATAGCT ATTTCCAAAG CCATGGCGGA ACATACCGGG AAACCAGAAG AATACATCGG TGAGTGCACG TGAATCTCTA CGACGGTGCA TGGTTGAGCA TTTGCCTCTC CATTAAATAC GATCTAAACA CAAATTGTTT CGGACGCAGC CGTTTCCATT AACGACAATG CAGACGTTAT CTTTGCCGGT TCAGACGCGC CCACGGCATT GGGTTGCATG TACTCTATTG GTGCGATTGC GATGGAGAGT AACGGCAAGA TTACGGCATC TGTATCGGAT CTTCTGGAAG AATATGGCGT CGACGCGGCT CGAATCTATA TCAACTTTTT TGACATGCCC CGGGCCAATG TCGGTTGGAG CAAGCGAACG TTTGCTGGAT AAAATCCGAC CAACCGACAT GTTTTGTTTC CGCACTAGAC AAATTACTAG ACAAGAAGTG CATCCAGGGT CATAGCAATC GAACGGACAG ATCGAAGAAC AAAGTAGAGA ATAATTGGCA TTTACCGAAT TTCCCCAAAT TATTACC
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Protein sequence | MSVETRHPFC DLPGDPSLIL TTNVDLGSKK LDILKAISKA MAEHTGKPEE YIAVSINDNA DVIFAGSDAP TALGCMYSIG AIAMESNGKI TASVSDLLEE YGVDAARIYI NFFDMPRANV GWSKRTFAG
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