Gene PHATRDRAFT_49638 details

Gene Information

• Locus tag: PHATRDRAFT_49638
• ID: 7198271
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011691
• Strand: +
• Start bp: 274682
• End bp: 276672
• Gene Length: 1991 bp
• Protein Length: 611 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002184335
• Protein GI: 219128260

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TGAGAATACA ACTCCTATTG GTTTCCAAGA CTTCAAGAAA CAAAGCTTCT CCTTTATTTT 
GTGTAAGCTA CAGGAGGTAG GGAGAACTTC ACATCATTCC ATCAGCAACC GTTTCCGGCC 
ACAACCAATA TGCGGAATCC GTTTCGACGC AATAACCCTG CGGCGTCGAA CGCGAATCCC 
CGTCCGATGC AACACGAAGC TTCGAACCCG TTTGAGGTGC TACAACGCGG TGCCCGACAA 
GCTGCTAGCT CCCTTATCGA TAGTTTAGGG GCTACGCATC AGATGGTCGA AGAGCAATTT 
GAAGCCGCAA CGCAAGCCGC GATGCATGCT TCCATGCAAG CCCCTGCTTC TTCTCAAGGA 
CCGCCCGCTG CCTCGGCACA GGTCCTGCAC CACCTTCCGC AGATTCGTAT CACTCGTCAA 
GATTTGGTCG AACCTACCAA TCGCGAATGT TGCGTCTGCT TCGATCTTCA TCGTTTGAAC 
GACAAGGTTT TGCGGCTGCC CTGTGCTCAT GTTTTTCATC CACAATGCAT CACCAAGTGG 
CTACAATCTC ACTGCACCTG TCCGGTTTGC CGATACGAGC TACCAACGGA TGATCCCGAC 
TACGAACGGG GCCGGATTGA GCGGATGCGG AACCGGAAAC CGAGATTTGC GAGGCATGAA 
CTGGATCGGA TGACAGTCTC TGAGTTGAAA GCGCTTTTGG CGAAATCGAA AAATTGCCGC 
CAACGGCCGG TGGACAAGCA TGATTTAATA TCTCTCCTTA TTTCGTCGAA CGCTATTGAT 
GTCGTGGAAA CTCCGGAACC GGTTACTTAC CGGCTCTCTG CCTTAAAAGA TATGAGTGTG 
GGAGCATTGA GGCGGTGTAT GAACGACGAA GCTGGGGTCT TTTACGATCC GAACGAGGTG 
GTAGAAAAAG CAGATATGAT CCAAATTTTT TTGAACAGTG GGCGCTTACT CTTAAACCCT 
GAAGATAATG CGACCAGTGA AATCAACGAA GACGACTTTG TTTGGAAGGA TCTGTCGCCG 
ATCAACAGCG ACGAGGATGA AGAAGACAAA TATCCGTCTT CCGCAGTTGC GTCTATCCTT 
GTGGAGACTG TAGTAGATGA AACTGATGTA TCAATATATG ATCGAAGAGT TAACAAAATG 
TTACTCATGG AAGAAAACTC GTCCTTTGAC GAAAGTTCGT GCACTCCAGC CATGGAAGAT 
GTGGAAAGAT TACTAGAGTT CAAGGATGAG ACATCGGGCT CAGCGACTGC CGACGAACAA 
TTCACTGGAA TAGATGCCGT TGAGGTCGCA TTGACTGATG CACCTATGGA CATGGGAGCT 
GATTCGCAGA ATGTTAAACG GCGAAAACGT GTAAGAAGTT TAGGTGGGAA CGAATATACC 
AGGCAGGTGG CAAAAGAAAA AAACTCCGCA AAAGCATCTC TGGACTCTAT TGACGAAGGA 
AATGTCACGG AAGGATCCAC GGCTCTCCGC CTACCAGTGG ACGATAATGA GGAAAGTATG 
GATTTCCACG GAGAAGAAAA TATCTCCTCT TGTTTCGACG ACTTGAGCGT TTCCGAACTT 
CGAGCACGCG GGCGAGAAAT ATCGGTTGAT CTTTCCGATT GTATCGAACG TGCGGAAATA 
GTCCAGCGCC TTTCGTCCAT TGAAAGTGAT GGACAACGTG CCGGCCGCCT CATGAATTGG 
GAAAAGTGGC GGGTTTCAGA TCTCCGAGCG GTTGCCGCGT TGACCGGTGT GGACTTATCA 
GAGTGCCTTA ATCGACAAAG TATGGTTGAA AAAATGCAAC ATGCAGGAGT TGAACGTCCT 
CATTTAGGAC GATTCTTGCA CTCACTGGCT CCATTAGCAC GTCTTACCAG TCTACAATTA 
CTGGCCGTAG CACGAGACTG GCAGGTTGAC GTTTCCGACT GTCTCGAAAA AGGCGATATT 
TTGCGCCGAT TGGTTGAATC GGGGCCAGGT ATACGATTTG AATGAATACA TTCGTCATAT 
TTTAGTTGGT G 

 

Protein sequence

MRNPFRRNNP AASNANPRPM QHEASNPFEV LQRGARQAAS SLIDSLGATH QMVEEQFEAA 
TQAAMHASMQ APASSQGPPA ASAQVLHHLP QIRITRQDLV EPTNRECCVC FDLHRLNDKV 
LRLPCAHVFH PQCITKWLQS HCTCPVCRYE LPTDDPDYER GRIERMRNRK PRFARHELDR 
MTVSELKALL AKSKNCRQRP VDKHDLISLL ISSNAIDVVE TPEPVTYRLS ALKDMSVGAL 
RRCMNDEAGV FYDPNEVVEK ADMIQIFLNS GRLLLNPEDN ATSEINEDDF VWKDLSPINS 
DEDEEDKYPS SAVASILVET VVDETDVSIY DRRVNKMLLM EENSSFDESS CTPAMEDVER 
LLEFKDETSG SATADEQFTG IDAVEVALTD APMDMGADSQ NVKRRKRVRS LGGNEYTRQV 
AKEKNSAKAS LDSIDEGNVT EGSTALRLPV DDNEESMDFH GEENISSCFD DLSVSELRAR 
GREISVDLSD CIERAEIVQR LSSIESDGQR AGRLMNWEKW RVSDLRAVAA LTGVDLSECL 
NRQSMVEKMQ HAGVERPHLG RFLHSLAPLA RLTSLQLLAV ARDWQVDVSD CLEKGDILRR 
LVESGPGIRF E