| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49624 |
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| Symbol | |
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| ID | 7198264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011691 |
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| Strand | - |
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| Start bp | 230979 |
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| End bp | 233546 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184425 |
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| Protein GI | 219128448 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACATC GAATGAGGTC TTTGTTTCTT GGACTCTGTC TAGCCGTGCT CGCTGTATTC
GTAGACTCGT CGTCTCCCTT TGGCATTCAA ACCAATGAAG ACACAGCGAG TACCTTCGCG
TCAAGCATGG TGTATGACGC TACGCTTTCG AGACTATACA TTACCGGTGC CACCTACGGT
CGCGAATTTG ACAAATCTGG GAGCACTACA CCGATCTCAC AAAATACCAG CGATTGCTTT
TTCGGCATTC TACAACTCCC AGTAAAAGCC GCCAACACCC TACCAGTCTG GATCATTCGC
CAGCAGATAG GTCGAATGAA CACACAAGAG GTATGCTCTG CAATATACAC CACAGGAAGT
GGAAGTGACA GAAAAATGTA CGTTCTTGGC CACTCTGTGG AATCTCCGAG TGTGCTAGCA
CCTTTGAAAT TAGAGGGTCC GAACAGGACA GTCTATGGAA TGGTTCTTGA TTTAAACTGG
AAGGGAAAAG TACATGGTGG CCATCTGATA GAGTCTGCAG CGGTTCAAAT CCCGATTGCT
ATGCAATTCG ACGATGGCGA CTTGCTGATA GCCTCTCTGA AATCGGCTTC CCCTGAAGCT
CAACAGGCCG TCCAAAGCCA ACAGTCTCAA GATTCTACTG CCGACCCTAC CAATGATGGA
GCGTATTTCC TGTTACAGAA TGACAAACCT CTGTCTCTTT CTCTTCAAAG ACTACATCGT
ATGGGTAATC GCTCAGTTGC CCCTCGTTTG GATTCCGGCA GAATTGAAGA TGGACCTATC
CTCCAAACTC TAGATTCTGA ATGGTGGAAG GAATTTGCGA CGGACCAGCT CGCTAGTGTT
CAACTTTCCA GCATGATTCG ACTGAACGAC TCAACTACGA TTCTTGCTGG TTCCACACGA
GGTACAGGCA TTGCCTTTGG TGGTGGATTT GCGGCTAACG CATTGGACGG GTTCTTGATG
TTGTTTAAAT CAAGAACAGG AAATACAGTG AGTTCGAAAA GAGTTTCTTC AAATGGAATG
GATCGAATTC TCGGGCTTTG CCAAGCAGCC GACACAGGTT TCCTTTACGT AACTGGAATG
ACAGATGGCA ATCTACTACA AGGTGAAGCT GTGCCGGTGC CTTCCTCGCA ACCCGGACAC
TATCAAGCCT TTCTACATAA AATCAACGCA ACAACACTGG AAACGATTTG GACCTACCAG
ATTGGAACAA TCCTCGTTGG AGATGATACG TTGCAGACAC CACAAGTACA TGGACTGGCT
TGTGATGTCA CTTTGGACGA TAAACTGGTC TACATGACTG GAATCGTCAA AGACGGTGCC
GTTTTGACAA CTAATGGGGT GACAGGTATT GTGCCGCAGA GTGCAGGAAA GGACGACATT
TTTGTGGTTC AGCTGAACAC GGATGATGGC TCTCTTAACT TTGCCCTACA AATCGGTACA
TCAGAAGACG ATACTCTTGC ATCTGGAATT GGGGTACTTT GCGATAAGGA CGGAAACGCG
ATGTTGCTTT GCAATACGAA AGGTTCGATG TTTAGAGAGA AATCTGTGCA ACCGAACAAC
TTTGTGCACA GCAACATAGC TGTTCTCTCA GTGGATAGAT TGTCAGGTGC TTTGGCATCT
GAATTCATGC AGAATACCGG GGCACCTACT CTTGTTCCGA CGGTGGCCCC GATGGCTCCA
CTACTCACCG TCATTCCGTC TTCAACGCTC TCATCCGCTA CGGCGCCTGC TCAGACCGTT
AATGGATCGT CATCAACTGA ATTATCGAGT GAAGGTCCAT CTTTACCGTT CGTTGCAACT
AACCTTCCAA CAGCTGTACC AGCACAGGCC ATAACTTTTT CGCAGAGACC CCAGATTTCG
CCTATGCTTA TCCCAACTAA TCATCCTTCA ATAGAAGCTC GAGTATCAAC GAACGTGCCA
ACTAGGGGGA AAGGAAGCTT TGTTTTAGAG TCAGACTTGG GCAGAGATGA AGACGAAATA
GCGGCGATCA ACATAACCAA CCCAACTACA GACAATGCAG GAGTCAGCAC AGGTCGAGCG
ACAAGTAACC TTTACATTAT GAGCGCGATC GGCTTGATCA ATATCATCAT GGGCAGTCTC
ATCGTCATAC TCATTCTTCA GCGACGTAAT AAGAAAAAAG TTGGTGCTGA ACATGCTCTA
TCTTCTCGTG GGTTACAAAG CCACAGTACC ACGGGATACT CTGATTCAAG TTTGCAACAT
CACTTCTTTA ATGACTCAAA TCGAGAAGTA GAAGAACCAC TCTATTTGGA TGATGGAGTC
TTCCACGATG ATGCCACTTT CCTATCCGGA ACTACGTTGT ACGAAATTCC AAGAAGCTTC
GAAAGCAGCG AAAGTCGACT AGAGAATGTC GATACTTTAC TGAGACTTAA ACCTGCCTAT
ACTATGGCGA CAAGGAACCG CGATGATGAA GCCTTCAAAC GGCTAAAGCA AACACGAACA
CGAACCATCG AGCTTGAAAG ATTTGAGCCT GTACTCGAGG CCAACATTGC ACGCAATGGA
ATTTACAGGC CGAGTAGGGA TCCTTTCGAT CTGTCACGTA ATGCGTAG
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| Protein sequence | MSHRMRSLFL GLCLAVLAVF VDSSSPFGIQ TNEDTASTFA SSMVYDATLS RLYITGATYG
REFDKSGSTT PISQNTSDCF FGILQLPVKA ANTLPVWIIR QQIGRMNTQE VCSAIYTTGS
GSDRKMYVLG HSVESPSVLA PLKLEGPNRT VYGMVLDLNW KGKVHGGHLI ESAAVQIPIA
MQFDDGDLLI ASLKSASPEA QQAVQSQQSQ DSTADPTNDG AYFLLQNDKP LSLSLQRLHR
MGNRSVAPRL DSGRIEDGPI LQTLDSEWWK EFATDQLASV QLSSMIRLND STTILAGSTR
GTGIAFGGGF AANALDGFLM LFKSRTGNTV SSKRVSSNGM DRILGLCQAA DTGFLYVTGM
TDGNLLQGEA VPVPSSQPGH YQAFLHKINA TTLETIWTYQ IGTILVGDDT LQTPQVHGLA
CDVTLDDKLV YMTGIVKDGA VLTTNGVTGI VPQSAGKDDI FVVQLNTDDG SLNFALQIGT
SEDDTLASGI GVLCDKDGNA MLLCNTKGSM FREKSVQPNN FVHSNIAVLS VDRLSGALAS
EFMQNTGAPT LVPTVAPMAP LLTVIPSSTL SSATAPAQTV NGSSSTELSS EGPSLPFVAT
NLPTAVPAQA ITFSQRPQIS PMLIPTNHPS IEARVSTNVP TRGKGSFVLE SDLGRDEDEI
AAINITNPTT DNAGVSTGRA TSNLYIMSAI GLINIIMGSL IVILILQRRN KKKVGAEHAL
SSRGLQSHST TGYSDSSLQH HFFNDSNREV EEPLYLDDGV FHDDATFLSG TTLYEIPRSF
ESSESRLENV DTLLRLKPAY TMATRNRDDE AFKRLKQTRT RTIELERFEP VLEANIARNG
IYRPSRDPFD LSRNA
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