| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49621 |
|---|
| Symbol | |
|---|
| ID | 7198262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011691 |
|---|
| Strand | + |
|---|
| Start bp | 227277 |
|---|
| End bp | 228855 |
|---|
| Gene Length | 1579 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002184326 |
|---|
| Protein GI | 219128242 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATTGTCGAAA GATCCCGCGT GTTTAGTGGC CGTCTTGTTT GAACAACTGC CAGCGATACC
CCTGCACATT TGTCGCTTGG CGAGTTAACT TCGTCCAATG TCGCACGCCT GTTTCTACCG
CTCACTCCGC GCGCACCAGC CTCTCTTGTC CGGACGATTG CCACAACAGA GAAGTTTTTT
GCAGACGCAA AAGCAGAAGT GGAGTGGATT TTGCAGTGGA TTGAATTCCC GCGCGTACCT
GCATTCAACA CAGTTTTCGT CCTCCTTGTA TCCTGCGGGC TTCTCGCCTC ACCGACAATT
ATCTCCGTGG TTGATTCCGT GTCGGTTTAT TTCGAAAGCG CATAACAAAA AACGTCAAAT
CTATAGAGAT TGGGTGCGGA AACAAAAAAG GCTAAGAAAT CTGCACCCGG CCGGCAAATG
GAAACGGATT CTTTCCGCCT GTAACTATTG GTGGAGCAAT GTGAACCTGC GAGACGATGC
GTTCCTCAAG AATGAGTTGC GTAAACAAGG GGGATGGTGC CGCATCTCGG AACTGCTGAA
GTTTCCGAAG CTAAAAATTT GGACCGATGC GGAACTTGTC ATTGATTCCC TGACAAGTAC
CGCTGCACAT AAGTGGGAAG TGGATGTGAA TGAGGCGTTT CCTATGAAGT CCAAAGTTCG
CCGCGTCGAC GTGACGCTGG ACTATATCGA TGAAATCGAG CGCGAGATGG ATGTAGACGA
AAACGATGAC AATAAAAGCA CGACGGCTAG TGGCCTTGAT CTTGAAAGCA ACCCACTCTC
TGAACACGAA ATCAAAAAGT CGCCTCCAAC ACAAAAGGAA CGAAATCTGC CATTTTTCAA
TTCTAAACGG AAGGTTATCG TGGCCCGGTC ACCCAATGAC ATCGCTCCCC TATGCATGAA
ACTTACGAAA TCAATCAAAC AATCGGGACC GAATTCCTTC CCTCTAGTAC TTGGAATGGA
CGTGGAGTAC GCCACATTGG AATTGGATAT TCGGGGTGAC CTGCCGGCCA TGCTGCAGCT
TGCGAGTCCT GATCCTACCG GACCAGTTGG TCTTTTCTGG CTCGACAAAC TACCGAATCA
CGGTAAATCC ATCTTGCACG ACGGAGAAGC GTATAAACCG TTGCTATCCA TTTTGGCGTC
TTCGGATATC GAGAAGGTCG GCGTTGGTTT GACGTCAGAT GTCCGGCACT TGTTGGATTG
GTGGGGCGTT TCCGGTGCGG CCACATACTC GCCATACTTT ATCGCGAACA CGGTGGATAT
ATCGGAAGTG TACTCGTCAG ACACACGCGT GGCCGACCGT TCTCTGCAGG AAATGTGCGA
GTCGGTGTTG CAGTTGCGTT TGCGCAAGCG CAAGTCGATT TCGAGAAACA AAAAACGCTC
GCACTGGCGT GCGGAAGTGT TGACCAAGCA AATGAAAGAA TACGCTGCCA ACGACGCGGC
GTGCGCAGTA GAGGTCTATT TGTCCCTGTG TGCCGAAGAA TCCGACGACA GTGATGATTC
AGGTGACGAC GACGAAAACG ATCACAGCTC CATAGATCAT TCGGATGCTG ATGAAAGGGA
TCCTAGTTCA TACCAATAG
|
|---|
| Protein sequence | MKSKVRRVDV TLDYIDEIER EMDVDENDDN KSTTASGLDL ESNPLSEHEI KKSPPTQKER
NLPFFNSKRK VIVARSPNDI APLCMKLTKS IKQSGPNSFP LVLGMDVEYA TLELDIRGDL
PAMLQLASPD PTGPVGLFWL DKLPNHGKSI LHDGEAYKPL LSILASSDIE KVGVGLTSDV
RHLLDWWGVS GAATYSPYFI ANTVDISEVY SSDTRVADRS LQEMCESVLQ LRLRKRKSIS
RNKKRSHWRA EVLTKQMKEY AANDAACAVE VYLSLCAEES DDSDDSGDDD ENDHSSIDHS
DADERDPSSY Q
|
|---|
| |