Gene PHATRDRAFT_49620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49620 
Symbol 
ID7198282 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011691 
Strand
Start bp221869 
End bp223129 
Gene Length1261 bp 
Protein Length280 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184424 
Protein GI219128446 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAACTTTTCA TGTTTCCGGA CAAACTTCGA AACACCTACG CAAACCGAGC AACACACCTT 
CTTTGGTAAC CTTGTAGCAT ATTACTCTGA TAGTATGGCT AAAACGCAAC GCGTGGCCAA
ACTCCAGGCC CGCAAGACCA TGTCGGAGCT CACAAACAGC AACGCAGCGA GCTTGAAGAT
GAAGATGGCG AACGCTGCGG ACCCGGAGAG CGATCACTCC CGTTCGATTG CCCGAGGAGG
TGTGGCTTGT CCGTTCAATT GGCGCTTGCA TGACATGCTG GATGCGGTTG AGAATGAAGA
TCTTACCAGT ATTGTATCCT GGCAACCCCA TGGGCGCTCG TTCACAGTCT ACAAGCCGAA
GGAATTCGTA GACAAGGTAA TGACGAGGTA CGCACTTTTG TAGCCGTTTT TTTCCCATGG
AAGCAAACCG AACTCTCTTC TAGAAGGTTC CTCACTCCTT TTAATTATCA TCCCGTAGAT
TCTTCAGCCA GTCCAAGTAC GCTTCGTTTC AGCGGCAGCT CAATCTTTAC GGGTTTTCCC
GTTTGTCCCA CGGACCGGAC AAAGGCGCCT ATTTTCACTA TTGCTTTGTC CGCGGAGACC
GTGAGAAAGT CCGTGGTATG GTCCGCCGCA AGATCAAGGG CAACAAAGTT CGTCGTGCTC
TCACCGTGGA AGAGGAGCCC GACTTCTATG ATTCCGTCTG GCACAGGGCG GAACACCGAG
GTTTGGCCCC TATCGCCTCG ATTTCGCCAG AACCACCTTG CTTGGAGACG ACTACGAGTC
CGTCTACCAA GCCGGAAAAG CCTGTTCTTC TTCCCAAGCC GGCGAATACC TGGGAGGCTT
TCGAAGAAGT GAACGACCAT GACTTAATGC TCTTCGCGGG AACAAGCAAG CTTCTGGACG
ATGATCTTTT ATTGGATAAT GTCCTTTTGG GTTCCCCCTA CGTTCAAGGA AGTCGCTATG
CGGAAGGAGT GATCAACAGG GTGACCTCCT CCACAACCTT GTCCCTGGAC TATCTCTGCA
GCGTTTAAGT CGCGTGTGTT GCTTTGCTAG TTTTCTGTGT AAGTCCCACG AGAGATATCT
CGATTGGGCC ATCCTCCTCT GGGGGTGCTA CATGTAAGAA GCGAAAATCT GCATGTCAAA
AATTGTGTGT TACAAAGACC CACGAGGTAT GTCTTCCTCG CTTGGGCTGC CCGGCAACGA
AACCGCGCAC TAAACTTTAG ATCTGATATA TAAACGCTAA GTTAAATCGT GTTGTGTACC
C
 
Protein sequence
MAKTQRVAKL QARKTMSELT NSNAASLKMK MANAADPESD HSRSIARGGV ACPFNWRLHD 
MLDAVENEDL TSIVSWQPHG RSFTVYKPKE FVDKVMTRFF SQSKYASFQR QLNLYGFSRL
SHGPDKGAYF HYCFVRGDRE KVRGMVRRKI KGNKVRRALT VEEEPDFYDS VWHRAEHRGL
APIASISPEP PCLETTTSPS TKPEKPVLLP KPANTWEAFE EVNDHDLMLF AGTSKLLDDD
LLLDNVLLGS PYVQGSRYAE GVINRVTSST TLSLDYLCSV