Gene PHATRDRAFT_49610 details

Gene Information

• Locus tag: PHATRDRAFT_49610
• ID: 7198276
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011691
• Strand: -
• Start bp: 198318
• End bp: 200312
• Gene Length: 1995 bp
• Protein Length: 620 aa
• GC content: 56%
• Product: exo-1,3-beta-glucosidase
• Protein accession: XP_002184418
• Protein GI: 219128434

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTCCGAAAGC AAGTCGTCCA GGAAGTCCCG CACAAAACCA AGGCCAACAA TTCTCGCCAT 
CGAATACCCG AACGCCATAC ATTCGTTCGC TCCAAATTCG TGTCCATTCT TCGACAAAAC 
AACGTAGGAA CCATGGTGTC TGTCCAAGAT GCAACGATTA CGAATGACAA TGAACACCAT 
GACGACTACG CATTACCGAC ACCGCCCTCA ATTACGGAGA CGTTGCCGCT GCCCGCCACT 
CCCATCGTGA CGTCGCGGGA CAAAGCCTGG ATTCGTGGCG TCAATGTTGG TGGTTGGTTA 
ACATTGGAAC GCTACATTGT CCCGTACCAG TTTGCCATTA CCTCGTGTCA CTTACGGGGA 
GACTTTTGTT GGTACGCTGA CGCCCTCGGC GCCCCACCCG TGACGCATCC CGACTATCAG 
CTCTGTAGCG ACGTTCGGGA TACATGCGAA CCCGTCCAGG AACCCAACGT CTATGGTAAT 
ATGGATTATC CCTTTGACGA GTACAATTTG GGCGCCGCCT TTCCCGATCC CCGGATCGGA 
GCGCAGTGGC TCGATTACCA TTTCCGTTAC TTTCTCAGCC GCTCCGATTT GGAGCGCCTC 
GTCGACGCCA AAGTCACGCA CGTAAGAATT CCTATTCCAC ACTGGATTAT GGGAGATGTC 
CAAGACGGGG AGCCTTGGAT TGTGGGATCT CGCTGGCGGT ACTTTCTCCG TGCGCTCGGA 
TGGTGTCGCG AACTGGGATT GAAGGTATGG CCCGACATTC ACACGGCACC GGGCTCGCAG 
AATGGGTTCG ACAATTCTGG GCAACAGCTG CCGGGCGTTT CGTGTCGGGG ATGGGCCGAT 
GAACCACACA ACGTGGCGCG GTCGTTAATG GTCATTCGAG ACGTTGTGGA CGAGATTGTG 
CGGGAAGGAT ACGGGGACGT CGTGACCGGC TTTGGCCTTT TGAACGAACC CTTCAAGGAC 
TGTCCCCGCG ACGTGTACCT GGACTTTATC GACCAAGGAT TGGATATCGT CCGGGAAGCC 
TTGGGGCCCG AAACAGCGGT CTACGTTTCC GATCTTTTTT CCGCCATGTC CTTCAATGAC 
GGCTCCTGGT GGCTAGATCC ATCCCGGTAC AACCATACCT ACCTCGATAG CCACTACTAC 
CACGTTTTTG CCGAACACCC CCGGGCTCTC AGCCCCCGTC AACACATTGC CTACACTTGC 
CAGTCCGAAT ATCACGCCCG ACTTTCCGAT TCCGGCAGTG CGAGTTGCTG TTACACGGAC 
GCCCCCGTGT ACAACGCCAC ACCTAGCGTG GACGGCGTCC AGCGATTGAT TGGTGAGTGG 
AGCGCGGCCA CGGACACCTT GCCCGTGGCG ATGCTGGACA CGATCATGGC ACACATTGCC 
ACGCACGGAA CGGCGTTGCG TATGAACCGT ACGTTGTCAA CGGCACGTCA AGATTTCTTG 
CGCCACTTTG TTCACGCGCA AATGGTCGCG TACGAAGCGG CCGACGTGGG CGTCGGCGCG 
GGCTGGTTCT ACTGGACTTT GAAAATGGAA GGCGGGGCCT TTGCGGAATG GGACTTTTTG 
CGGGGTGTGG AGGAGGGGTG GATCGTCCTG CCCGCCTCGC ATCACACGCC GGCGCAAGCA 
GAATTCGGGA CGTGCTACGA GATAGTTTTT CAAACCGATG ACGATCCGTC GATTATTGAC 
GAATTTCCAC CACCGACGGA CGATGACGCG AACAATTGGC AGGGTGTAGT TCTGGATGAC 
GATGTGGTGG TCTCGCACGG GCAGAGTTTG TTGTCCGGTG GGGGTGGTCG CAAGCAATAC 
AACGATAGCA TCAGCGAGAA CGATACGGCG GGAAGAGTGC CCACCATTCC GTCGCACCAA 
ACGCCGTCGC ACTGGATGCT GGGCACTGTC TTGCTTATTC TACTGGTTGT GGGTGCCGGG 
TGGCGTTGGC AACGACAACG GTCGACGAAA CAGGCCGACT ACGAACAAAT CGAGGAAGTT 
GGCATTACCG TCTAG 

 

Protein sequence

MVSVQDATIT NDNEHHDDYA LPTPPSITET LPLPATPIVT SRDKAWIRGV NVGGWLTLER 
YIVPYQFAIT SCHLRGDFCW YADALGAPPV THPDYQLCSD VRDTCEPVQE PNVYGNMDYP 
FDEYNLGAAF PDPRIGAQWL DYHFRYFLSR SDLERLVDAK VTHVRIPIPH WIMGDVQDGE 
PWIVGSRWRY FLRALGWCRE LGLKVWPDIH TAPGSQNGFD NSGQQLPGVS CRGWADEPHN 
VARSLMVIRD VVDEIVREGY GDVVTGFGLL NEPFKDCPRD VYLDFIDQGL DIVREALGPE 
TAVYVSDLFS AMSFNDGSWW LDPSRYNHTY LDSHYYHVFA EHPRALSPRQ HIAYTCQSEY 
HARLSDSGSA SCCYTDAPVY NATPSVDGVQ RLIGEWSAAT DTLPVAMLDT IMAHIATHGT 
ALRMNRTLST ARQDFLRHFV HAQMVAYEAA DVGVGAGWFY WTLKMEGGAF AEWDFLRGVE 
EGWIVLPASH HTPAQAEFGT CYEIVFQTDD DPSIIDEFPP PTDDDANNWQ GVVLDDDVVV 
SHGQSLLSGG GGRKQYNDSI SENDTAGRVP TIPSHQTPSH WMLGTVLLIL LVVGAGWRWQ 
RQRSTKQADY EQIEEVGITV