Gene PHATRDRAFT_49604 details

Gene Information

• Locus tag: PHATRDRAFT_49604
• ID: 7198214
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011691
• Strand: -
• Start bp: 172732
• End bp: 174858
• Gene Length: 2127 bp
• Protein Length: 608 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002184413
• Protein GI: 219128424

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAGTCAAGCA ACGCACCCTT GTTCTCCATA CCATGACCGT AGCTACTCAA GAAGTATCCA 
ACGCCCCACT GCATCGCGTA TGGAAAACAG CGGTGACGCT GACTATCGGT GCCGCAGTAT 
TACTCCTAGG TTGCGCCGCT TCGTCCCTTA GTCCAACGGG AAAAGGAGGC GTTGTGGGCG 
CTTCGTACGA TCATCTCATC TCCGCGAGTA CCGTGACTAC TTACAGCGAT CCTCCTCTCT 
CTCGTTACCT TCAAGACACT GACTTGGTAT GCCAGGTCAC CGTCTTTGAA ATCGTCAACG 
ACGCCCTGAA CGGTGTTACC GATTCCGCGG ACTTTTATGA ATGCCAGGTA GTCCTCGGAA 
CAACCTTGGA CAGCGTGCGT TTTACGCTGG AACTCCCCGA ATCCCTCGCA GCGGAACAGA 
AGGCATTGGT ACTCGACGAC TCTCAAGATG TCTTTTACGT CAAGATCCCC AACGGTAGTG 
TGGACCTCAC CCAGGCTTCC ATTGTGGTTC CTGACGCCAA CGCAATCTCC CTAATCTCTC 
CTCCGCACGG TCTTGCTCCC CCGGGACGCC GTCTTGCTGC TCCTACCGGT ACCATCTCCG 
CAGTAGTTAT TCGAATCACC GATAACAGTC GTTCCAGTCC CTCATTTTCC GCCTCGGAAC 
TCTACCAGAG CCACTTTGGC AACCAAGTGT CTCTCAAATG GCAGTACCAC AAGTGCTCCG 
CGGGCAAGCT CCGAATTGAA CCTGCTCCCG TTGCGATTCT GGATGTCACC GTTAACCGTC 
GCGCTGCTTC TTCAAACTCC CAACAGATGG TGCAAGCTGC CGAACAAGAA GCTCTGAATG 
TACTGCGTAC TCGTCACGGA AGAAGCCATT CGTCATTGCG AGACTACGCC GGTATCACTA 
TCTTTGTGAC ACCTCCTATG GGTAACTGGT TGGCGTACGC TTCGATTGGA GGCGGCCTCT 
CGGTCTACAA CGATAAATGG GGAGGTTACA TTGCTTCTAT TATGCACGAA GTAAGTTGGG 
TAATCCTTGT TCACGCACCT TGCTAGCGTT TTTTGTTTCA GCGTACTCAC ACAACCTGTG 
GAAATCTTTG TCTATAGGTC GGACACAACT TCAAGCTTTT GCACGCCAAC GAACGTGGCG 
AATACCAAGA TCACACCGGG TACATGTCCG GAGCGGTTCT CGGATACCAC GATGCTCAAC 
ACTTTCCCGA AATGTGCTTC AATGGAGCCA ACCATTGGGC TCTCGGTTGG TACTCCGACA 
AGACCCAATC AGTCAGTCTC AACAACTTGC AACAACCGAC TCTGCTTTCC ATTGCGCCCT 
TTGTGGACTA TCAACGTGTC CCTGGTGGCT ACCCAGTCGT TGTCCAGATC CCCGAGATGA 
ACTACTACCT CCAATACAAT CGCGCTAAGT CCTTCAATGC CGATACGTAT GAATACGCTG 
ATCACGTTAC CATCACTCTG CAGCAAAACT CTGCTACGGA ACTCGTGGAA GCCATTAGTC 
CATCTGATAC CCCCAAGTTT GAGGCCAACT ACGGATCACA GAAGGTAACC ATCCAAATCT 
GTTCCGCGGT GGCTGGAAGC GGAAATACCC CCGAGCATAT GCTTGTCTCC GTTGGCCTGA 
ATGGCGCCTC GGCCTGTAAT TCTGGTGGTG GCGGCGGTGG TGGTGTTGGT GCACCCGACA 
TCTTTACACC AAACCAAGAC AATGAGGTTT GTGGACTGCA GAGCGGAGCC AAGTGTACTT 
CCGACGGGCA ATGCTGTTCC AAACGGTGTC GCACTTCCTG GGATCCTGCT TACAACATTT 
GCAGCCACGA CACCACCAAC CCATTTGCGA TAGACCGACA AGATGTACTG GACGCCCTGA 
ATCTCGGCGG CTCGGACCGT TCTCGAACTC GAGGCGGCAA CGTACGGAGC TTGCGTTTGC 
AAAATGTGGA ATCTACTTCG AACTAGGTCA CTACCGACAG TTCCTAGATT GCGCACGGAA 
TACTACCTGC AATCTATGAT GTTACATATC CTTTCTATCA TTCGTTCCAA CTTCTCTCTA 
CCGTTCAAAA CCAATTTCAT GGTTCTGAAC TAATGTTGTC GAAGTGTGTA AATGATCATC 
ATAGCTAATG TAAGAACCAC GATTTGT 

 

Protein sequence

MTVATQEVSN APLHRVWKTA VTLTIGAAVL LLGCAASSLS PTGKGGVVGA SYDHLISAST 
VTTYSDPPLS RYLQDTDLVC QVTVFEIVND ALNGVTDSAD FYECQVVLGT TLDSVRFTLE 
LPESLAAEQK ALVLDDSQDV FYVKIPNGSV DLTQASIVVP DANAISLISP PHGLAPPGRR 
LAAPTGTISA VVIRITDNSR SSPSFSASEL YQSHFGNQVS LKWQYHKCSA GKLRIEPAPV 
AILDVTVNRR AASSNSQQMV QAAEQEALNV LRTRHGRSHS SLRDYAGITI FVTPPMGNWL 
AYASIGGGLS VYNDKWGGYI ASIMHEVGHN FKLLHANERG EYQDHTGYMS GAVLGYHDAQ 
HFPEMCFNGA NHWALGWYSD KTQSVSLNNL QQPTLLSIAP FVDYQRVPGG YPVVVQIPEM 
NYYLQYNRAK SFNADTYEYA DHVTITLQQN SATELVEAIS PSDTPKFEAN YGSQKVTIQI 
CSAVAGSGNT PEHMLVSVGL NGASACNSGG GGGGGVGAPD IFTPNQDNEV CGLQSGAKCT 
SDGQCCSKRC RTSWDPAYNI CSHDTTNPFA IDRQDVLDAL NLGGSDRSRT RGGNVRSLRL 
QNVESTSN