| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49599 |
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| Symbol | |
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| ID | 7198210 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011691 |
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| Strand | + |
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| Start bp | 159945 |
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| End bp | 161831 |
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| Gene Length | 1887 bp |
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| Protein Length | 459 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002184314 |
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| Protein GI | 219128216 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00680785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ACTCGATCTC GAGAGGTATT GTTTGTTAGG CAAAGCAATC CATCGCCTTT AGAGCGAAAC
ACAAAGGCTT GAATGCCGAC ACGGATTGTC CTCAAGGAGG CGTCGCCACC GTCTCAGCTG
ACACCACGCA GTACACCGGC AACCGCCAGA AATACACCGT CTCCACCGCG CAACGTGCGT
CTTCCCAATC GTCGACACCG CGACGCGGAC CCGTCCCACA TTAATGTCCG AATTACTTTT
CAACAGCAAA CGGCAAGGGA TCGAACGAAT GTGACGTCCC GAGCTTCATC GCGACGCAAG
TCGGTCGCTA GTTTTCGCTC GTCCATTCTC CGAGAAATCT CCACAGCCCG TGACGGGACG
GCAGTCGAAG ACGACGACGT AGAACGTCTC TCCAGTGACG ATATTCGAGC ATCACCGCGA
TTATTGGGAT ACTTCTTTTG TATGGTGGCG GGAGCAGTCA TGCTGGTGTC CATTGTACAG
TACGTACCGA CCGCAGTTTC GCACACGAGC TTGTTTCTGG TACAATCTTA CGTCTGCGCT
TTTTTGTTTT GGTTTGGTTC AACCCTATTC TCTCTCGGTG CGTTTTGTTA GATTCTATCG
CGAACAAAAA CTATTCAGCG AACTCTTGGA TCAGGAAAAA TTCTTTGTCG CGAGTACGGG
TCTGGTTTAT CGCTGGAAGC TGTGGGGTTC CATATACATG TCCGCCACCG GAACGGGTCT
GTGCCTGCTG ACTCTACTGG TGCACTTTGA TACCGTCTGT TTACCCCGAT TGTGGAAAAG
CGTCTTTCAA GACGGGAGTA CGGCTGAACG GAATCTCATT TTGTTCTTTA TCTTGTTCTG
GGCAGCCAAC GTACATATTT GCACGTCTTC CTTGTCGGTG GGGGAGTCAC AGGCCAATAC
CTTCTTTACC GCTTGGATTG GTAAGTGCAG TAGCGCAGGT GTAGAAGCGT TTGTCTCTCT
TTGTTTACAT AAATTATTTT TTGTCACTCA CTATGAAACA TTGCGGAACT TGGAAAAATC
AAGCTTTTGG ATCGATTGCC TTGAATTACA CGGTGTGGCG AGAATCGGCG GGTCTACCGT
CCCTGGCGGA CAAGGTCAAT TTTCACCAAC GGGAAACAAC GTACAACTGG ATTTGGACCG
GAATCTTTTC GGCAGTTTTT GCCGGATCGG CGACGGACAT TTTCATCAAT CGCGAAGAAA
TCACGCTCCG ATTGCGGGAC GAGATTTTGG TGCTGGAAAA CAAGGAGTGG GTCATCGTCT
TGGCTGTGGT TTGGACTGAA GTGGCCGTTT GTATCATGGC TGTGTTGTTT AATGAGTGGT
TTCCGCAACC CATGACGCTG CCTGGTCGCA TCCAGTGTCG GGGGGCATCG TATCGGTGTG
TGCTGGGGTG GCGACAGTTG GAAGGGCCCA TTGTCTTGGC CGCCTTGGGA ACCAAGTTTT
GGGTAATTCT GGAGTACACG GGGGTGGGTG GGGTTGTCAA CGGCCTTTCC AATGGCTACT
TTGGCGTCTG GGGCTCGTTC TTTAATAGTG TTTTTACTCT AGGGACGTGG CTACGAGAAA
ACAAGAACAT TGAATACATC GTAAGGGAAG AAAGCGACGA AGATGAGCAT CGAGTGAACT
CTTGATAATT GTATCGGTTC ACGGAGCTTC TGTAAGCCGG CCAGTGTGAC TGTCAACTTG
GACCATTGAG GAAAATTGCC GTGTCAAACC TGCAGACAAT TAATTTGTGA TTGCGCAGTT
GAACATTCCC TATTGGGTCA TTATCGAACT TGCTTTTGGG ACATTCTCTT TCATACTTTT
CGGAGCGATT CCTACAGTGC ACCCCTTAGC CGTTGGATGC AAGGCAAACA GTAAAAGAAT
TTTAAACCTA ACTGATTGCA TCACGTT
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| Protein sequence | MPTRIVLKEA SPPSQLTPRS TPATARNTPS PPRNVRLPNR RHRDADPSHI NVRITFQQQT
ARDRTNVTSR ASSRRKSVAS FRSSILREIS TARDGTAVED DDVERLSSDD IRASPRLLGY
FFCMVAGAVM LVFAHELVSG TILRLRFFVL VWFNPILSRE LLDQEKFFVA STGLVYRWKL
WGSIYMSATG TGLCLLTLLV HFDTVCLPRL WKSVFQDGST AERNLILFFI LFWAANVHIC
TSSLSVGESQ ANTFFTAWIA FGSIALNYTV WRESAGLPSL ADKVNFHQRE TTYNWIWTGI
FSAVFAGSAT DIFINREEIT LRLRDEILVL ENKEWVIVLA VVWTEVAVCI MAVLFNEWFP
QPMTLPGRIQ CRGASYRCVL GWRQLEGPIV LAALGTKFWV ILEYTGVGGV VNGLSNGYFG
VWGSFFNSVF TLGTWLRENK NIEYIVREES DEDEHRVNS
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