Gene PHATRDRAFT_49595 details

Gene Information

• Locus tag: PHATRDRAFT_49595
• ID: 7198206
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011691
• Strand: -
• Start bp: 147973
• End bp: 150135
• Gene Length: 2163 bp
• Protein Length: 643 aa
• GC content: 56%
• Product: predicted protein
• Protein accession: XP_002184405
• Protein GI: 219128407

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.107678
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GGATGTGCAG TAGTGTTGCG ACCGAACGTA ACGTACATTG GCATTGCCGT AATAAACGTC 
GCGTTCTCTG TTCGTGTGCC AGTTCTTTGG AGATTTCCAT TCGGCGGTGC GCGGGTTGGA 
GATGACGAGC GCGTCTTCGG CATCCGGAAC CTCCACCGAC GCCGTGCGCC GAACCCGCGC 
CGTGGCGTTC GGAAGGAACT ACTTTCATGC CGTCGGTGGA ACCCAAAAAG AAGTCGATAT 
CGACGAGGAA GGCAGTGCCG TTGAGCTCTA TCAGTGGGAA CAACCTCCCT GGAATGGCGA 
AAATATAGAT GATCAACGAA TAACACAAGT AGCCTGCTCT TCGCAATCTA CACTCTTCTT 
AACGGCCACT GGCAAGGTCT ACCAAACCGG GACACTGCAC GGAGTCGTGT ACAAAACTCC 
CGTCCCAGTG ACGATTCCGA TTCCCCGCAA ATGCGTAGAA ATTGCGGCGG GGCGACACTT 
TTGTTTGGGT CGTATGGAAG GCGGACTCGC GGTGGTCAGT TGGGGCGCTG GCCATTTTGG 
ACAGCTCGGA CTCGGTCACG CGGAAGGCAA CAGCCAGATT ACCTTTACTC CGTACCCGAT 
TGTCATGCAA CGCTTACTCC CGCGGGTAAT CGGTAGCCCC GTCCTCCAAG TTGCCTGCGG 
GAGTTGGCAC GGTCTAGCCC TCTCCGCCTC GGGTCGCGTC TGGGCGTGGG GTTCCAACCG 
AACCCAGCAA TGCGGGCGCA AACCAACGCT CACTGCCGGA TCCAATCACG CACCCACCGT 
TCTGGTGCCA CTACCGGTAC CACTCGAAGT CATGGCGACA CAAATCGCCG CGGGTCGGTC 
GCATTCCGTG GCCATTGCCC GAGATCAAGT CTACTGCTGG GGAAGTACCG CGCACGGTCA 
GTGTGGCAAC TCCGCCCGCC GCGGTGGAGT CACCGCTCCA CGTCTCGTTG AAGGACTCGC 
CAATCTGACG GTAGAACACG TTGCTGCCAA CGGCAATCAT ACCTTGGCGC TGACGAACGG 
AGGGCGCGTC TTTGCGTGGG GGTCCAACGC GGAAGGACAG CTGGGAACGG GCCCGGCGTG 
TGCGGCGCAA CCCAAACCCC GCCACGTTGG TGACGTTGAT TTTGTGGCCA TTGAAGCAGG 
GAAAGAATGG AAGGCCAACA AGTTTGCGGA GGTGTCGGCG AGCGCGCTTT CCAGCGTGCC 
ACGGATTGCC TCCGTATACG CTGGGGCGTC TTACTCGGCC GCTGTGAGTA CGTCGGGACA 
CGTCTACACG TGGGGATCGA ACGATGTGGG ACAAGCCGGT CTAGCAACAC CGCTGCACGT 
TCCCATGAAG GAGAATCCCA TTCACGTGGC TACCGCAAAA ACGTCGACAA TTCGCGATTT 
GAATGTGGCC ACGTTTGATT CCCGACACGA CGTCCTGTTA CCACAAAGGG TGGATGCCGC 
ACGGAACTTG TTCGTGCGAA ATGTGGCCTG CGGACCGAAT CACATGTGGT GTATAGGAGA 
AGAACGAACA ACTTTCGAAA CCGAAATGAT GGTGGGCACT ACGCTATACA AAGCCCAAGA 
AGAGCGACGG AAACGCAGTC TCCAACGAGC GCGTAACGCC CTACAGGGAA GGTCATCGCC 
GATTCACTAC GCTACAATGG GAGAAGACGA TACAAAAATG GCGACAGTCA CGGAAGACAA 
AACTCTCACC TTCATATGTA GCGAAATGGC TGCATTGCCC GTGGAAAATT TGACTCTACT 
TTCGGAAAGC GCAAATGTGG TTGACCCGCC TCTGCCAAAA GCGACTCTCG GTGATGGAAA 
AATGGATGCT CTAGTGGTGA AGGACGCTGT CAACGCATCA ACAAGTACCA TTACAACAAC 
ACCAGCCGAG ACGTTTTCGC CGAAAAATGC CATTGCTGAA ATCTCAGCAA GCAATGCTCC 
CAAGGAAGAA CAAACAAATG GCATGGCAGC CGCCCAACTA CCGACGCGAC GGCCCAACAT 
GATGAAACGG CTCTCGTGGC ACGTCCGCAA AAAGCTAGGA GGCAACTCTC GCAAATCGCT 
CCATGGTTTC TGAAAGAGGA ACAGTGCTTT GGTGTAGTCA TTCTACCCGT GCTGCTCAAG 
TCTTCTAGCC AATTGTTGAC AACGGGAGGC TAAGCCTTTA TTATAATTTT GCATCAATGC 
TAT 

 

Protein sequence

MTSASSASGT STDAVRRTRA VAFGRNYFHA VGGTQKEVDI DEEGSAVELY QWEQPPWNGE 
NIDDQRITQV ACSSQSTLFL TATGKVYQTG TLHGVVYKTP VPVTIPIPRK CVEIAAGRHF 
CLGRMEGGLA VVSWGAGHFG QLGLGHAEGN SQITFTPYPI VMQRLLPRVI GSPVLQVACG 
SWHGLALSAS GRVWAWGSNR TQQCGRKPTL TAGSNHAPTV LVPLPVPLEV MATQIAAGRS 
HSVAIARDQV YCWGSTAHGQ CGNSARRGGV TAPRLVEGLA NLTVEHVAAN GNHTLALTNG 
GRVFAWGSNA EGQLGTGPAC AAQPKPRHVG DVDFVAIEAG KEWKANKFAE VSASALSSVP 
RIASVYAGAS YSAAVSTSGH VYTWGSNDVG QAGLATPLHV PMKENPIHVA TAKTSTIRDL 
NVATFDSRHD VLLPQRVDAA RNLFVRNVAC GPNHMWCIGE ERTTFETEMM VGTTLYKAQE 
ERRKRSLQRA RNALQGRSSP IHYATMGEDD TKMATVTEDK TLTFICSEMA ALPVENLTLL 
SESANVVDPP LPKATLGDGK MDALVVKDAV NASTSTITTT PAETFSPKNA IAEISASNAP 
KEEQTNGMAA AQLPTRRPNM MKRLSWHVRK KLGGNSRKSL HGF